Gene Pcar_0269 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPcar_0269 
Symbol 
ID3723356 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePelobacter carbinolicus DSM 2380 
KingdomBacteria 
Replicon accessionNC_007498 
Strand- 
Start bp335444 
End bp336127 
Gene Length684 bp 
Protein Length227 aa 
Translation table11 
GC content65% 
IMG OID637749850 
ProductABC-type transport system, ATP-binding component 
Protein accessionYP_355700 
Protein GI77917885 
COG category[V] Defense mechanisms 
COG ID[COG1136] ABC-type antimicrobial peptide transport system, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones75 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGCGATC CGAATCCGAT CATCCGGCTG CAGAACATCC AAAAGACCTT CACCCTCGGC 
GACCTGGATA TCGACGTGCT GCGCGGCGTC AGTCTGGATA TCGGGCAGGG TGAATTCGTC 
GCCTTGCGGG GGGCTTCCGG GTCGGGCAAA TCGACCCTGA TGCACATCCT CGGACTGCTC 
GACCGCCCCA CGGGCGGACA GTACCTGCTG CAGGGCGAGG ATGTCGCCGG CTTGCCGGAT 
GATCGCCTCA GCGCGCTGCG CAACCGACTG TTCGGCTTCA TCTTCCAGAC GTTTTATCTG 
ATCCCCTACG TTTCCGCGCT CGAGAACGTC ATCCTGCCCG GCCTCTACGG CGCCACTCCG 
GCGCGACATC TGCGCCAGCG GGCCGAGGAA CTGCTGGGCC AGGTCGGTTT GGCGGATCGC 
CTGCACTTTC GCCCCGGGCA ACTCTCCGGC GGCCAGCAGC AGCGGGTCGC CATGGCCCGC 
GCCCTGCTCA ACGATCCCCA GGTATTGCTG GCGGACGAAC CGACCGGGCA GCTCGATTCC 
GCCACCAGTA CGGAAATCAT GGCCCTGCTC CGGAGCATTC ACAGTCAGGG GCGCACGGTC 
ATTCTGGTCA CCCACGACGC CGCTACGGCC GACTATGCCG AGCGGGAGGT ATTGCTGCAT 
GACGGCCTGG TCCAGGATCA CTGA
 
Protein sequence
MSDPNPIIRL QNIQKTFTLG DLDIDVLRGV SLDIGQGEFV ALRGASGSGK STLMHILGLL 
DRPTGGQYLL QGEDVAGLPD DRLSALRNRL FGFIFQTFYL IPYVSALENV ILPGLYGATP 
ARHLRQRAEE LLGQVGLADR LHFRPGQLSG GQQQRVAMAR ALLNDPQVLL ADEPTGQLDS 
ATSTEIMALL RSIHSQGRTV ILVTHDAATA DYAEREVLLH DGLVQDH