Gene Pcar_0006 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPcar_0006 
Symbol 
ID3723396 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePelobacter carbinolicus DSM 2380 
KingdomBacteria 
Replicon accessionNC_007498 
Strand
Start bp8886 
End bp9737 
Gene Length852 bp 
Protein Length283 aa 
Translation table11 
GC content54% 
IMG OID637749585 
Producthypothetical protein 
Protein accessionYP_355439 
Protein GI116878341 
COG category[S] Function unknown 
COG ID[COG1729] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value0.000521994 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGAAGGAGG AACGGGCGAG GGCGCGCAAG ACGTCGAATA AAAGACGTTA TTTGTCGCTG 
GCCGGGGCCG GGCTGCTGCT GGCGGTGCTC ATAGGTTGGT ACGCTATGGC GGTCAACCGG
GGCGATATGG CGCAAAAGCT CTACCGGCGT GCCGAAAAGC ACATCGAAAA AGGCGCCTAT
CGCACGGCGG TAAGTCAGCT ACGCAGTCTG CATGATCATT ATCCGGCAAC GGAAACCGGT
GCCCGGGCGC TGCTGCTGGC CGGGGATATC CTGCTTCTGC ATCTACGCCA GGATCAGGAA
GCTCTGCTGT CTTTTCTGCT GGTCGAGCGC GACTACCCCG ATACCGCCTG GAGCCAGAGA
GCGCGGCGCC AGGTGGCCGA TATTTACAAA TATCGACTGC AGGATTACGG TAGAGCACTG
GTCGCCTATC AAAAGATTCT GGATGGTCCG TCAACGCAGA GAGAGATCGT TCAGTACGAG
ATAGCCGACA CGTATTTTCG CATGAATAAT TTTGAGCAGA CGCGCATCGA ATTCGAAAGT
CTGATCAATG AATATCCAGA GAGCTCTCTC CTTCCCGAGG CACTGTACCG TATTGGATGT
GCCTTTATGC TGGAGGGCAA TCTCTCCGAT GCGGTACAGG TGTTACAAAG GCTTTGTCGT
GACTATCCCG AGCATTCATT TGCTTTGGAG GGATATTTTA CCCTTGCCGA AATCCATGAG
GAGCGTGGCG AACTGCGCAA AGCTCTGCAG GTACTTGCAG GGCTTGAAGG TCGGTATGCC
AGAGAGCCCA TTCTGGCACA ACGCATTACT CAGGTTCAAA ATCGGATAAG GAAAAAAAAG
AAGGCCATCT GA
 
Protein sequence
MKEERARARK TSNKRRYLSL AGAGLLLAVL IGWYAMAVNR GDMAQKLYRR AEKHIEKGAY 
RTAVSQLRSL HDHYPATETG ARALLLAGDI LLLHLRQDQE ALLSFLLVER DYPDTAWSQR
ARRQVADIYK YRLQDYGRAL VAYQKILDGP STQREIVQYE IADTYFRMNN FEQTRIEFES
LINEYPESSL LPEALYRIGC AFMLEGNLSD AVQVLQRLCR DYPEHSFALE GYFTLAEIHE
ERGELRKALQ VLAGLEGRYA REPILAQRIT QVQNRIRKKK KAI