Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pcal_2096 |
Symbol | rps12P |
ID | 4910103 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pyrobaculum calidifontis JCM 11548 |
Kingdom | Archaea |
Replicon accession | NC_009073 |
Strand | + |
Start bp | 1944993 |
End bp | 1945436 |
Gene Length | 444 bp |
Protein Length | 147 aa |
Translation table | 11 |
GC content | 51% |
IMG OID | 640125849 |
Product | 30S ribosomal protein S12P |
Protein accession | YP_001056977 |
Protein GI | 126460699 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0048] Ribosomal protein S12 |
TIGRFAM ID | [TIGR00982] ribosomal protein S23 (S12) |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | 36 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGCCTGGGA AAAAGTCGCC GTACGGCCTC TTCGCAGGCG GCAAGCTTAA GAAAAAGCGG CAGAAGTTTA GGTGGAACGA CGTGACTTAC AAGCGCAGGA TGTTGGGCCT TGCAGAGAAG TATGACCCAC TTGAGGGCGC CCCCATGGCT AGAGGAATAG TGCTCGAGAA AGTTGGAGTT GAGGCGAGGA AGCCTAATGC CGCCGTCAGA AAATGCGTCA GAGTACAGTT GGTAAAAAAT GGGAAAGTAG TGACAGCCTT TGTGCCATAC GACGGTGGCT TAAACTACAT AAATGAGCAC GACGAAGTTA TAATAGAACG CATAGGAGGC CCCGAGGGCA AGTCTCTTGG AGACATCCCG GGGGTCAGGT TTAAAGTCGT CAAAGTAAAC GGCGTATCTC TCTGGGCCAT TTGGCGTGGT AAAAAGCAGA AGCCGACAAG GTAA
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Protein sequence | MPGKKSPYGL FAGGKLKKKR QKFRWNDVTY KRRMLGLAEK YDPLEGAPMA RGIVLEKVGV EARKPNAAVR KCVRVQLVKN GKVVTAFVPY DGGLNYINEH DEVIIERIGG PEGKSLGDIP GVRFKVVKVN GVSLWAIWRG KKQKPTR
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