| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pcal_2090 |
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| Symbol | rpoH |
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| ID | 4910166 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pyrobaculum calidifontis JCM 11548 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009073 |
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| Strand | + |
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| Start bp | 1936528 |
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| End bp | 1936755 |
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| Gene Length | 228 bp |
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| Protein Length | 75 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 640125843 |
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| Product | DNA-directed RNA polymerase subunit H |
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| Protein accession | YP_001056971 |
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| Protein GI | 126460693 |
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| COG category | [K] Transcription |
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| COG ID | [COG2012] DNA-directed RNA polymerase, subunit H, RpoH/RPB5 |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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| |
Fosmid Coverage information |
| Num covering fosmid clones | 33 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | GTGTCTAAAC AGACGCTTGG AGTAAGAGAT GTGATACTAA TTCCAAAAGA GGAGGCCAAG
GCCTTAATGA GGCAACTGAG GCTAAGGCCT TGGCAACTTC CGTGGATTAG GGCAAGTGAC
CCACTTGCAA AATCTGTGGG AGCAAAGCCG GGGGATGTAT TGAAGATCGT TCGCGATTCG
CCTACCGCAG GCGAGGCGGT GGTTTACAGA CTCGTGGTGC CTGGGTAA
|
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| Protein sequence | MSKQTLGVRD VILIPKEEAK ALMRQLRLRP WQLPWIRASD PLAKSVGAKP GDVLKIVRDS
PTAGEAVVYR LVVPG
|
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| |