| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pcal_2030 |
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| Symbol | |
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| ID | 4909702 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pyrobaculum calidifontis JCM 11548 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009073 |
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| Strand | - |
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| Start bp | 1884015 |
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| End bp | 1884731 |
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| Gene Length | 717 bp |
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| Protein Length | 238 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 640125783 |
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| Product | nuclease |
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| Protein accession | YP_001056911 |
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| Protein GI | 126460633 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG1525] Micrococcal nuclease (thermonuclease) homologs |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 1 |
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| Fosmid unclonability p-value | 0.000000000391548 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | decreased coverage |
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Sequence |
| Gene sequence | TTGTTTGCCG CTGTTGTCGC TCTTGCGCTG TTGTTTGCAG TCCCAACGTT TGGCGCAGTT
GAGGAGCACT GCGGCGTAGT CACTAGGGTC GTCGATGGGG ACACGTTCTA TGTGTCTGGC
TTGCCCGAGC GGGTTAGGCT GGCCGACGTC GACGCTCCCG AGCTCTCTAC TGCTGAGGGG
CAGAGGGCCA AGGCGGCGCT TGAGGCCCTC CTCCTGGGGA GGCGGGTCTG TCTAGACATA
GACGACTTGT ACAAGACCGA CAGATATGGA CGCTTCGTCG CTGTGGCGTA CCTCGACTAC
AACGAGACGC ATTGGCTGAA CGTAAACCAG TGGCTCGTCG AGCGCGGCTA CGCCGCATAC
GTGGACTACC CCAACGAGTT CCACCCGCCG TGGCCCCTCT ACTTGCCCAA GGCCGCTGCG
CCTAAGGCGA CGACCAGCGT AACCCCCGTC ACCGTCACAG TAACTCAGAC TTCCACCACT
ACGGTGGCGA CCACAAACAC AGTCACAGCC ACGGTGACGG TCACCAAAAC TGTGACAGAT
ACAGTGGTGG TTACGCATAC GGTAACGCAA AAGGAGCCTG TCACGTACAC GGTAACCACC
ACTACCACGG TAACTGAAAC TGCCATAGCC TTCGGCGGCT ACGCCTTGGC ACTGTTAGCC
GTAGTCGTGG CCCTACTGCT AATGGCGGCT GTCGTAGCTA AATTAGCCAA GCGATAA
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| Protein sequence | MFAAVVALAL LFAVPTFGAV EEHCGVVTRV VDGDTFYVSG LPERVRLADV DAPELSTAEG
QRAKAALEAL LLGRRVCLDI DDLYKTDRYG RFVAVAYLDY NETHWLNVNQ WLVERGYAAY
VDYPNEFHPP WPLYLPKAAA PKATTSVTPV TVTVTQTSTT TVATTNTVTA TVTVTKTVTD
TVVVTHTVTQ KEPVTYTVTT TTTVTETAIA FGGYALALLA VVVALLLMAA VVAKLAKR
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