Gene Pcal_1784 details

Gene Information

• Locus tag: Pcal_1784
• Symbol: rpl14p
• ID: 4909207
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Pyrobaculum calidifontis JCM 11548
• Kingdom: Archaea
• Replicon accession: NC_009073
• Strand: +
• Start bp: 1654958
• End bp: 1655392
• Gene Length: 435 bp
• Protein Length: 144 aa
• Translation table: 11
• GC content: 58%
• IMG OID: 640125533
• Product: 50S ribosomal protein L14P
• Protein accession: YP_001056667
• Protein GI: 126460389
• COG category: [J] Translation, ribosomal structure and biogenesis
• COG ID: [COG0093] Ribosomal protein L14
• TIGRFAM ID: [TIGR03673] 50S ribosomal protein L14P

Plasmid Coverage information

• Num covering plasmid clones: n/a
• Plasmid unclonability p-value: n/a
• Plasmid hitchhiking: n/a
• Plasmid clonability: n/a

Fosmid Coverage information

• Num covering fosmid clones: 9
• Fosmid unclonability p-value: 0.000196792
• Fosmid Hitchhiker: Yes
• Fosmid clonability: hitchhiker

Sequence

Gene sequence

ATGGCAAAGC GTGGCGGCAA GAGAACGGTA GGCGTCCCGT ATAGGTTCCA CGTGACTCCT 
GGCATATTTA TGAACAGCCT AGTCCCCGTG GCTGACAACT CTGGCGCGAA GCTGGTTAGA 
GTGATAGGCG TCGTTGGCCA CTACTCTAAG TCTGTGCATA GGAGAATTCC GGGCGCCGGC 
GTGGGTGACA TGGTGGTAGT TGTGGTGAGG GAGGGGAAGC CCGAGTTGAG GAAGCAGATT 
TTCAGGGCGA TAGTGGTTAG GCAGAGGAGG CCCTACAGGA GGCCGGACGG CACGTGGGTG 
GCGTTTGAGG ACAACGCCGT TGTCATAGTT ACGCCCGAGG GAGACCCGAA GGGCTCTGAG 
ATACACGGCC CCGTGGCCAT GGAGGCGACG CTTAGGTGGC CCACAATTGC AAACCTAGCC 
TCCATAGTGG TTTAG 

 

Protein sequence

MAKRGGKRTV GVPYRFHVTP GIFMNSLVPV ADNSGAKLVR VIGVVGHYSK SVHRRIPGAG 
VGDMVVVVVR EGKPELRKQI FRAIVVRQRR PYRRPDGTWV AFEDNAVVIV TPEGDPKGSE 
IHGPVAMEAT LRWPTIANLA SIVV