| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pcal_1766 |
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| Symbol | |
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| ID | 4909019 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pyrobaculum calidifontis JCM 11548 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009073 |
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| Strand | + |
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| Start bp | 1638564 |
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| End bp | 1639901 |
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| Gene Length | 1338 bp |
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| Protein Length | 445 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 640125513 |
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| Product | UDP-glucose/GDP-mannose dehydrogenase |
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| Protein accession | YP_001056649 |
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| Protein GI | 126460371 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0677] UDP-N-acetyl-D-mannosaminuronate dehydrogenase |
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| TIGRFAM ID | [TIGR03026] nucleotide sugar dehydrogenase |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 5 |
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| Fosmid unclonability p-value | 0.00000194311 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGCTTGCAG ACCTCTTGAA GAGGGGCGAA CTCGTGGTGT CTATATACGG GCTAGGCTAC
GTGGGCATGG CCTTGGCTGC GGCATGGTCG TACGCAGGGG CGAGAGTGAT AGGCGTAGAC
GTAGACCCAG CTAAAGTGGA GCGGATAAAC GCGGGGGCGA TAGAGTACCC GGAGCGAGAT
GTGGTAGACG TTCTTAAGCA GGCTTGGAGG GAGGGGAGGC TAACTGCCAC AGACGACGGC
GTAGTTGCGT CAATAAAAAG CCACGTAAAA ATCGTGGCCG TGCCTGTGCA CTTGCGGAAG
TCCCCCTCTT CTGTCGACGT GGACTTCTCG TCGCTACTCT CTGCGGTTAG AGCAATTGGC
AATGGCCTAA AGAGGGGGGA CTTGGTGATA GTGGAGTCAA GCGTGCCTCC GGGCACCACG
GAGGAAGTAG TTAAGCCAAC GCTGGAAAAC GCCTCAGGCC TGGCGGCCGA GGAAGACTTC
TACTTGGCCT ACAGCCCTGA GCGCATAATG GTGGGACACG CATTTAAGGA CATTGTGGAG
AATTACCCAA AGGTCGTGGC CGGCGTGGGG CCGAAGAGCA CCGAGGAGGC GGCCGAGCTC
TACCGCCTAA TCGCCAAGAG GGGCGTGATA ACTCTGCGCT CGCCTAAGGA GGCCGAGTTT
GAGAAATTGC TCGAGGGCGT GTACCGCGAT GTCAACATAG CGCTCGCAAA CGAAATGGCA
AGGCTGGCCA ACGCCCTCGG CATCTCATTC AAAGAGGCGC GCGAGGCGGC CAACAGCCAG
CCGTACAGTC ACGTGCACAA GCCGGGGGCT GGGGTAGGGG GCAACTGCAT ACCGGTCTAC
CCCTACTTCC TGCTATGGAC AGCGGCGAAA TTCGGAGTGG AACTCCCCTT GACGGCCACC
GCTAGGCGCA TCAACGAAAG CCAGCCCAGC GAGGTGGCTT ACGCGGCGCT ACGCGCAATG
CTGAAACACG GCATAAACCC GGCAACTGCA AAAATAGCTA TTCTGGGCCT CGCCTTTAGG
GGAGATGTAG ATGACACGCG GGAAAGCCCC ACATACGGTA TAGTGTCCAC ATTGGTAAAA
ATGGGCATTA AGCCGTCGCA GATAGTGGTA CACGACCCAT ATGTGAGAAG CGACGCGGCG
CTGGCCAAGT GGGGCATAGC GCTTACACAG AGCCTAGACG ATGCAGTAAG AGGCGCAGAT
GTGGTCATTG TAGCCACTGA CCACACGGCA TACCGCATGG AGGCGAGCAG ACTAGGCAGG
TCTATTATAA TTGACGCGAG GGGCGTCTTA ATTCCCGATA TAGAGATCTA CGCGATTGAC
GCAGGGCGCT GGCCCTGA
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| Protein sequence | MLADLLKRGE LVVSIYGLGY VGMALAAAWS YAGARVIGVD VDPAKVERIN AGAIEYPERD
VVDVLKQAWR EGRLTATDDG VVASIKSHVK IVAVPVHLRK SPSSVDVDFS SLLSAVRAIG
NGLKRGDLVI VESSVPPGTT EEVVKPTLEN ASGLAAEEDF YLAYSPERIM VGHAFKDIVE
NYPKVVAGVG PKSTEEAAEL YRLIAKRGVI TLRSPKEAEF EKLLEGVYRD VNIALANEMA
RLANALGISF KEAREAANSQ PYSHVHKPGA GVGGNCIPVY PYFLLWTAAK FGVELPLTAT
ARRINESQPS EVAYAALRAM LKHGINPATA KIAILGLAFR GDVDDTRESP TYGIVSTLVK
MGIKPSQIVV HDPYVRSDAA LAKWGIALTQ SLDDAVRGAD VVIVATDHTA YRMEASRLGR
SIIIDARGVL IPDIEIYAID AGRWP
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