Gene Pcal_1755 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPcal_1755 
Symbol 
ID4909728 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePyrobaculum calidifontis JCM 11548 
KingdomArchaea 
Replicon accessionNC_009073 
Strand+ 
Start bp1631129 
End bp1632115 
Gene Length987 bp 
Protein Length328 aa 
Translation table11 
GC content55% 
IMG OID640125502 
Productketol-acid reductoisomerase 
Protein accessionYP_001056638 
Protein GI126460360 
COG category[E] Amino acid transport and metabolism
[H] Coenzyme transport and metabolism 
COG ID[COG0059] Ketol-acid reductoisomerase 
TIGRFAM ID[TIGR00465] ketol-acid reductoisomerase 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.000701523 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGGCGAAGA TATATAGAGA CGGCGATGCA TCTCTAGACT GGCTAAAGGG GAAAACCATC 
GCAGTAATCG GCTACGGAAT TCAAGGCAGG GCACAGGCGT TAAACCTGAG AGATAGCGGC 
CTTGACGTAA TCATAGGTGC GAGAAGGGGA GGCAACTCCT GGGAGGCCGC AAGGAGGGAC 
GGCTTTCAGG TATACGAAGT GGGAGAGGCC GTAGCCAAGG CCGACGTAGT AATGATGCTC 
ATACCCGACA TGGAGCAACC GCACGTCTGG CGTGAACAAG TGGCACCCAA TTTGCGCAAG 
GGCGCCGTAG TCGACTTCGC CCACGGCTTT AACATTCACT ACAAGCTCAT CACGCCGCCG 
CCGTATGTAG ACGTCGTAAT GGTGGCGCCA AAGGGCCCGG GAAAGGCCGT GAGAGAGGAG 
TTCCTAGCCG GAAGGGGAGT GCCGGCGCTA GTCGCCGTCT ACCAAGACTA CAGCGGCGCG 
GCGTTGAAGT ATGCGCTGGC AATCGCCAAG GGCATAGGGG CTACGCGGGC CGGAGTAATT 
GAGACCACGT TTGCAGAGGA GACTGAGACA GACCTAATAG GCGAACAAGT GGTGCTAGTA 
GGCGGCCTAA TGGAGTTGAT AAAGAAGGGG TTTGAGGTAC TAGTTGAGAT GGGGTATCAG 
CCAGAGGTGG CCTATTTCGA AGTGTTGAAC GAGGCTAAGC TAATCATGGA TCTCATATGG 
CAGAGGGGCA TCTACGGCAT GTTAAACGGA GTCTCTGATA CTGCAAAATA TGGCGGTCTA 
ACTGTGGGGC CCAGGGTCAT CGACGACGAG GTAAAGGAGA AGATGAGGAG AGCCGCGGCG 
AGAGTTAAAA GCGGAGAGTT TGCCAAAGAG TGGGTCGAGG AGTACCAGCG AGGCGCCCCC 
CGCCTACGCG AGTTAATGGA AAAAGCGAAA AACCACCCCA TTGAAGCCGT TGGTGCAGAA 
ATGCGGAAGT TGCTGTTTGG GCCATGA
 
Protein sequence
MAKIYRDGDA SLDWLKGKTI AVIGYGIQGR AQALNLRDSG LDVIIGARRG GNSWEAARRD 
GFQVYEVGEA VAKADVVMML IPDMEQPHVW REQVAPNLRK GAVVDFAHGF NIHYKLITPP 
PYVDVVMVAP KGPGKAVREE FLAGRGVPAL VAVYQDYSGA ALKYALAIAK GIGATRAGVI 
ETTFAEETET DLIGEQVVLV GGLMELIKKG FEVLVEMGYQ PEVAYFEVLN EAKLIMDLIW 
QRGIYGMLNG VSDTAKYGGL TVGPRVIDDE VKEKMRRAAA RVKSGEFAKE WVEEYQRGAP 
RLRELMEKAK NHPIEAVGAE MRKLLFGP