| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pcal_1748 |
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| Symbol | rpl24p |
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| ID | 4909816 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pyrobaculum calidifontis JCM 11548 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009073 |
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| Strand | - |
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| Start bp | 1625771 |
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| End bp | 1626157 |
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| Gene Length | 387 bp |
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| Protein Length | 128 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 640125495 |
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| Product | 50S ribosomal protein L24P |
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| Protein accession | YP_001056631 |
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| Protein GI | 126460353 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0198] Ribosomal protein L24 |
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| TIGRFAM ID | [TIGR01080] ribosomal protein L24p/L26e, archaeal/eukaryotic |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 0.0064747 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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| |
Sequence |
| Gene sequence | ATGCCGTTTA CTGCGTCAGC ACAACCGCGC AAACAAAGGC TGAGTCTATA CGCCGCGCCG
CTCCACCTTA GGCGAAAACT GTTAAACGCA AAACTATCGC CTGAGCTTCA GAAGAAGCTG
GGCGTGAAAA GGTTGCCAGT AAGACGGGGA GATACCGTGT TAATAATGCG GGGAGATTTC
AAGGGCGTGA CAGGCAAAGT TGTCAAAGTG GATTTGAAGA GGGTGAGAAT CTTCGTGGAA
GGCGCTACTA GGACCAATAG CAGGGGGCAG ACGGTCTACT ATCCAATACA CCCATCCAAG
GTAATGATCG TAGACGTAGA TCTGTCGGAC AAAGCAAGGC AAAAACTTAT AGAGAGGAGG
AAGAGGGGCC AGCATGGTTC ATCTTAG
|
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| Protein sequence | MPFTASAQPR KQRLSLYAAP LHLRRKLLNA KLSPELQKKL GVKRLPVRRG DTVLIMRGDF
KGVTGKVVKV DLKRVRIFVE GATRTNSRGQ TVYYPIHPSK VMIVDVDLSD KARQKLIERR
KRGQHGSS
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