| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pcal_1707 |
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| Symbol | hemC |
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| ID | 4909016 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pyrobaculum calidifontis JCM 11548 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009073 |
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| Strand | + |
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| Start bp | 1589652 |
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| End bp | 1590542 |
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| Gene Length | 891 bp |
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| Protein Length | 296 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 640125454 |
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| Product | porphobilinogen deaminase |
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| Protein accession | YP_001056590 |
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| Protein GI | 126460312 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG0181] Porphobilinogen deaminase |
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| TIGRFAM ID | [TIGR00212] porphobilinogen deaminase |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 0.0124397 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAGATTA GGGTTGCGAC GAGGGGGTCG AAGCTAAGTT TATTACAGAC ACAGGAACTC
CTAGACCAAG TAAAGGCAGT TGAGCCAAAG GTGGAGTTTG AGCTAGTAGT TGTAAAAACC
ACAGGCGACG TCGTTCAAGA CAGGCCGCTT TACCAAATTG GCGTGAAGGG GATCTTCGAA
AAGGAGGTGA ACTTGGCAGT GTTGAGGGGG GAGGCGGATG TGGCTGTGCA CAGCTTGAAG
GATTTGCCGT CGGAGCTTAC GCCCGGCCTA GTGATCGCTG GCTTTTCGCG GAGGGCCCCG
CCCTACGACG TTGTAGCAAG CCGCGAAGGG TACAGCCTTT ACACGTTGCC GAAAGGCGCC
GTGGTCGGCA CATCTAGCGT GAGGAGGGCA GAGTTCCTAA GGGCCGTGAG GCCGGACGTC
GAAGTGCGCC CCCTCAGAGG CAACGTAGAT ACGCGCGTGG GCAAAATCTT GTCTGGCCAA
TACGACGCGG CCATTATGGC CATGGCAGGC CTCGTGAGGC TCTACGGCTG GGAGGCGCCA
GTGAAGCTGT CGCCGATTAG GCCCGAGGAG ATTCCGCCGC CGCCTGGGCA GGGGATCGTG
GTGGCGGTTG TAAAAGAGGG AGAGGCATGG CTTATCGACA TCCTTAGAAG AGCCAGCGAT
AGGAGGGCCG CGGTTGAGGC TACGGCTGAG CGGGAGTTTC TCATGCACGT AGGCGCCGGC
TGCCACGTGG CCGTGGGAGG ACTTGCCAGA TATGAAGACG GGGGGATGAG CTTCGTGGCT
GGGTATGCCT CAGGGGGTAG GAGGTATGTG ATAAAACTGT GGGGCGAAGA CCCGCGGGAG
GTTGGAAGAC GTGCAGCAGA GGAGATTAGG AAAATTAGAG AGGGAGATTA G
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| Protein sequence | MKIRVATRGS KLSLLQTQEL LDQVKAVEPK VEFELVVVKT TGDVVQDRPL YQIGVKGIFE
KEVNLAVLRG EADVAVHSLK DLPSELTPGL VIAGFSRRAP PYDVVASREG YSLYTLPKGA
VVGTSSVRRA EFLRAVRPDV EVRPLRGNVD TRVGKILSGQ YDAAIMAMAG LVRLYGWEAP
VKLSPIRPEE IPPPPGQGIV VAVVKEGEAW LIDILRRASD RRAAVEATAE REFLMHVGAG
CHVAVGGLAR YEDGGMSFVA GYASGGRRYV IKLWGEDPRE VGRRAAEEIR KIREGD
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