| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pcal_1704 |
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| Symbol | |
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| ID | 4908238 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pyrobaculum calidifontis JCM 11548 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009073 |
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| Strand | - |
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| Start bp | 1586781 |
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| End bp | 1587800 |
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| Gene Length | 1020 bp |
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| Protein Length | 339 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 640125451 |
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| Product | major facilitator transporter |
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| Protein accession | YP_001056587 |
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| Protein GI | 126460309 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2814] Arabinose efflux permease |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 0.013195 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGCCCTTCT ACATCTTCGA GCTCGGCCAC GGCGAGGTGG AAGTAGGCAT CGCCTACGCC
TCCTACGCAG CCGCCGTCGT TGTAATCCGG CCAGCGGCGG GGCACTTAGC CGATAAAGCG
GGCAGACGCC TTTCAATGGG CATAGGCGGC GTCCTCCTGT CCGCGTCTAT GACGCTGCTG
AGTCTCTCTA CGTCGATAAG CCACGTCTAT GCGGCAATGT TCCTATCGGG CGTTGCCTCA
AGTCTGATAA ACGTAGCCGC AGTGGCCTAC GTCTCAGACG TGGGAGGCCT AGAGGACCCG
GCGCTCTACT CCAAGCTCAA GATCGCCGCA GCCGCCGGCG CCGTGGCGGG AGGGGTCTCT
ATCCCTGCCG TCTATATTTT GTCGAAGCTC ATGGGATACG CGGCGGCGTT TAGACTTACC
GCGCTGGCTT TCGCCGCCTT ATCGGCCGCC GCGTTGTTCC ACCTCCCGGA GGAGACTAGG
CACTTGGCCG TCCGACACCA CCGCACAGAT GTGCGAGTCT TGTCTTGCAT AATCGTTGCA
TCGCTTCTCG CGGGCCTCTC CACCGGCTTA TACGGGCCCC AAGTGTTACC ATTCCTACAC
GACAGATTTT CCCTCTCCCC CTTCGCGGCA GTATTGGCGT ATTTGCCCGC GGCCATCTCC
TGGTTTGTTG GACCCCGTCT CGCCAGACCC GCTCGCTCAT CAGTTGCGCT AGGCTCTCTA
GTGGTCGCAG TGGCGCTTAT AGGCATGGCG TATTCGCCCT CTCCATACAT CTTCTCAGCC
ATTTGGGTCT TAGAGAGCTT AGGCGTTGCA GTATTATCCA CTTCGCTAGA ACAGATGGTC
TCTAGGAACG TCGCAGGTGT TTACTGGGCC AGGGGCTACG GGGTTTACCA GGGAGTTAAC
AACTTGGGCT ACGCTGTGGG CGCCGCGGTC TCCGGCTACA TGTACCCCCC ATTCCTATAC
GCCGTAATAC CCGCCGTAGC GCTCTCGGCG CTTTCCCTCA AATGCCTAAA ACCCCAATAA
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| Protein sequence | MPFYIFELGH GEVEVGIAYA SYAAAVVVIR PAAGHLADKA GRRLSMGIGG VLLSASMTLL
SLSTSISHVY AAMFLSGVAS SLINVAAVAY VSDVGGLEDP ALYSKLKIAA AAGAVAGGVS
IPAVYILSKL MGYAAAFRLT ALAFAALSAA ALFHLPEETR HLAVRHHRTD VRVLSCIIVA
SLLAGLSTGL YGPQVLPFLH DRFSLSPFAA VLAYLPAAIS WFVGPRLARP ARSSVALGSL
VVAVALIGMA YSPSPYIFSA IWVLESLGVA VLSTSLEQMV SRNVAGVYWA RGYGVYQGVN
NLGYAVGAAV SGYMYPPFLY AVIPAVALSA LSLKCLKPQ
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