| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pcal_1673 |
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| Symbol | |
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| ID | 4910265 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pyrobaculum calidifontis JCM 11548 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009073 |
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| Strand | - |
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| Start bp | 1560826 |
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| End bp | 1562469 |
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| Gene Length | 1644 bp |
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| Protein Length | 547 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 640125420 |
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| Product | AMP-dependent synthetase and ligase |
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| Protein accession | YP_001056556 |
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| Protein GI | 126460278 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG0318] Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 8 |
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| Fosmid unclonability p-value | 0.000119129 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | decreased coverage |
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Sequence |
| Gene sequence | ATGGAGACCT ATCAATTGAC ACTAAATAAC ATATTGAAAT ATGTAAAGGA GATTTATAGC
GATGTAGAAG TCGTCTACCG CCCACCTCAT GGAAACGACA TACGATCCAC CTATGGGAGA
GAATATGAGA GAGTGCTAAA GCTGGCAGAC GGGCTTAACA AACTCGGCGT AGGGCCTGGG
GATAGAGTGG CAACTCTCGA CTGGAACACC ATATGGCACT TTGAGCTATA CTGGGCAGTG
CCAGGCATGG GCGCCGTGCT CCACCCATTG AACGTAAGAC TGGCCCCCGA GGACCTCGTT
TACATAATCA ACCACGCTGG AGACAAAGTG TTAATATACC ACCGCGACTT TGCGCCGCTA
GTAGAAAAGC TAAAGCCACA CCTCAAGACG GTCCAACTCT ACATACAAAT AGCAGATGGG
CAAGGCCCCG CCACCAAGGA CGTAGAGATA GAAGACGTAA TAAAACAAGG CGAGCCAAAG
CCCTTGCCAG AGATAAGCGA GGACAAAGTC GCGACAATTG GCTACACAAG CGGCACCACG
GGCCGCCCCA AGGGCGCATA CTTTACACAC AGGGCGCTAA CATTACACAC GCTAGTCTCT
GCGCTCGCAT TTGCGGGGTT TAGAGGCTTT GCACGGCCCG AGTGTGTAGA GGAAATTTGC
ACATTTCTAC AGCTAGTGCC CATGTTCCAC GTGCACGGCT GGGGCACCCC GTGGACATTT
GCATTGCTTG GATGGCGCCA GGTGTACCCC GGAAGATTTG ACGCTGGACA CACGGCTAGG
CTCATAGCCG AGGAGAACGT CAAATCCCTG GCCGGGGTGC CTACGATGTT GTACATGATC
TTGACGCATC CAGACTTTCC AAAGTACGTG GAGAAGGTTA GGAAGATAAG GCCAATATTC
ACCGTGGGCG GGGCGGCTCT GCCTAAGGAA CTGGCTAAGA AGGCCGAAGA GGCCGGCTTT
ATCCCCAGGG TCGGATACGG AATGACTGAA ACTGCGCCGA TACTGACGCT GGGCTTCTTC
AAGCCCACGG AGAAGATTCC AAAAGACGTA GAAGAGTACT ACCACCTGCT GACGGCCACG
GGGTTGCCTA TTCCGCTGGT CGACTTAATG GTAGCCGATG AGAACTTAAG GCCAGTGCCC
CGCGACGGCA AAACAATGGG CGAAATTGTG GTAAGGGCGC CCTGGGTCAC GCCTGAGTAC
TTAGGAGACC CCGAGAAGAC TAGAGAGGCG TGGAGAGGCG GCTGGTTCCA CACAGGCGAC
GTGGCCATAT GGCAGCCAGA TGGCCGCGTT AGAATTGTGG ATAGGGCTAA GGACGTCATA
AAGTCCGGCG GCGAGTGGAT ATCGTCGCTA CAGCTGGAAG ACCTAATCCT AACTCACCCG
GCGGTAGCCC AGGCGGCCGT CATAGGAGTC CCGCACGAGA TGTGGGGAGA GAGGCCTGTG
GCTGTGGTCA TCTTAAAGCC CGGCGCCTCG GCTAAGGAGG AGGACATAAT TAAGCATCTC
GAAAAGTTCG TAGAGGCGGG CAAGATACCG AAGTGGTGGC TCCCAGACAA GGTCATCTTC
GTGCAACAGT TGCCGCTGAC CGGGACCGGG AAGATAGACA AGAAAGTATT AAGGGAGCAG
TTCAAGGACG TTTTAAAGAA GTAA
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| Protein sequence | METYQLTLNN ILKYVKEIYS DVEVVYRPPH GNDIRSTYGR EYERVLKLAD GLNKLGVGPG
DRVATLDWNT IWHFELYWAV PGMGAVLHPL NVRLAPEDLV YIINHAGDKV LIYHRDFAPL
VEKLKPHLKT VQLYIQIADG QGPATKDVEI EDVIKQGEPK PLPEISEDKV ATIGYTSGTT
GRPKGAYFTH RALTLHTLVS ALAFAGFRGF ARPECVEEIC TFLQLVPMFH VHGWGTPWTF
ALLGWRQVYP GRFDAGHTAR LIAEENVKSL AGVPTMLYMI LTHPDFPKYV EKVRKIRPIF
TVGGAALPKE LAKKAEEAGF IPRVGYGMTE TAPILTLGFF KPTEKIPKDV EEYYHLLTAT
GLPIPLVDLM VADENLRPVP RDGKTMGEIV VRAPWVTPEY LGDPEKTREA WRGGWFHTGD
VAIWQPDGRV RIVDRAKDVI KSGGEWISSL QLEDLILTHP AVAQAAVIGV PHEMWGERPV
AVVILKPGAS AKEEDIIKHL EKFVEAGKIP KWWLPDKVIF VQQLPLTGTG KIDKKVLREQ
FKDVLKK
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