Gene Pcal_1633 details

Gene Information

• Locus tag: Pcal_1633
• ID: 4909944
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Pyrobaculum calidifontis JCM 11548
• Kingdom: Archaea
• Replicon accession: NC_009073
• Strand: +
• Start bp: 1519911
• End bp: 1520627
• Gene Length: 717 bp
• Protein Length: 238 aa
• Translation table: 11
• GC content: 58%
• IMG OID: 640125380
• Product: nitroreductase
• Protein accession: YP_001056516
• Protein GI: 126460238
• COG category: [C] Energy production and conversion
• COG ID: [COG0778] Nitroreductase

Plasmid Coverage information

• Num covering plasmid clones: n/a
• Plasmid unclonability p-value: n/a
• Plasmid hitchhiking: n/a
• Plasmid clonability: n/a

Fosmid Coverage information

• Num covering fosmid clones: 34
• Fosmid unclonability p-value: 1
• Fosmid Hitchhiker: No
• Fosmid clonability: normal

Sequence

Gene sequence

ATGGACTTCT GGGAGACGTT GGCAAGGCGG CGGTCGATAA GGAGGTTTAA GCGTGTTAAA 
ATGCCAGAGG AGGACGTAAT TCGCATAATG GAGGCTGGGC GGTCGGCGCC GACAGATGCA 
ACTCTGCATC TGTGGACCGC TGTGCGGATT GTAGATGAGG CAAAGAGGGC CAAAATCGCG 
GAACTAATTG CGCAACCCCA CGTGGCCGAG GCCTCGGAGT TTTTCGTGTT TCTGGCGGAT 
TTGTATAGGC TGGAAAATTT GTTAAAGCAC AGGGGGAGGG AGCTGGCGAA AGACCGCTTC 
GCCCTTTTCG TATTCGCGGC AGTTGACGCA GCTTTGGCGG CTGAGAACAT GGCCCTGGCC 
GCTACTGCGC TTGGCTACGG CTCTTGTTTC ATAGGCGCGG TGCAAAACGC CGCTGAGGAG 
CTCATAAAGA TTCTAGAGCT TCCACGTCTG ACTTATCCAC TCTTCGGGCT GGCGATTGGC 
GTCCCCGACG AGGACCCGCC TCCTCGGCCT AGGCTCCCCC GCGACATGTT GTTCCACGTG 
GACAAATACC GGAGTTACAG CAGAGAGGAG CTGGATGAGG CGTACAGAGT CATGGCGAAG 
ATAACGAGGT CGGGGGACTG GCTGAGGCTG TTGGAGAGAT ATGCGGCCGC TGGGGGCTAC 
TTTGAGGCGA GGAGCGCCCT CATGCGGCGG CTCCTCGGCG AGCAGGGGCT TGGGTAG 

 

Protein sequence

MDFWETLARR RSIRRFKRVK MPEEDVIRIM EAGRSAPTDA TLHLWTAVRI VDEAKRAKIA 
ELIAQPHVAE ASEFFVFLAD LYRLENLLKH RGRELAKDRF ALFVFAAVDA ALAAENMALA 
ATALGYGSCF IGAVQNAAEE LIKILELPRL TYPLFGLAIG VPDEDPPPRP RLPRDMLFHV 
DKYRSYSREE LDEAYRVMAK ITRSGDWLRL LERYAAAGGY FEARSALMRR LLGEQGLG