| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pcal_1566 |
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| Symbol | |
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| ID | 4909210 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pyrobaculum calidifontis JCM 11548 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009073 |
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| Strand | + |
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| Start bp | 1457867 |
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| End bp | 1459051 |
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| Gene Length | 1185 bp |
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| Protein Length | 394 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 640125314 |
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| Product | hydrogenase formation HypD protein |
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| Protein accession | YP_001056450 |
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| Protein GI | 126460172 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0409] Hydrogenase maturation factor |
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| TIGRFAM ID | [TIGR00075] hydrogenase expression/formation protein HypD |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 33 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGGCCGAGT TCCTCTTCCG GAAAAATATC AAAATGACAG CGCAACTGAA GGATTTAATC
GCCAAGTATG CTGAGTACTT AAAGAACAAA TATGGAAGAG ATTACGTCTT CAAGATCATG
GACTTCTGTG GGACACACGA GTGGACAATT GTGCATTTTG GGCTTAGGAG TCTTGTTCCC
AAAAACGTCG AGCTAGTGCC TGGTCCTGGC TGCCCCGTCT GCGTCGTCCC CTCTTACTAC
ATAGAGGAGG CAATAAAGCT AGCGCTAGAC GGCGTAGTTA TATACACATA CGGCGATGCG
TATAGACTGC CCGCCATAAG GCCTGTCAAG GGGGTGAAGT CGCTTGCAGA GGCTAAGGCG
CAGGGCGCCG ACGTCAAAGT GGTGTCCCAC ATACTCCAAG CAATTTCGCT GGCAACTCAC
AACAAGAAAC CCGGCATGTT TCTGGGAATA GGCTTTGAGA CCGTGGCGCC GGGCTATGCC
GTGGCGATCT TAGACGGGAA AATCCCAGAG AACTTGAAGA TTATGAGCTT GGTGAAGTTG
ACGCCGCCCG CTGCTTACTT GGCCATAGAC ACGATAAGGG AAAAGCCGAC GGACTTCCCC
ATCATGGGCG TCATAGCGCC TGGCCACGTG TCAACGATAA TAGGGGCAAA GGCATGGACC
CCCATCGCTG AGAATTTTGG AATCCCTGTG GTAGTCGCAG GGTTTGAGCC CAACGATGTG
TTGTTTGCAA TAGCCGAGGT CTTAAGACAG TTGAAGAATG GGGAGAGCAA AGTCGTAATA
GAGTACACGA GGGCGGTTAC TTGGGACGGT GACCTAAAGG CCCAGGCGGC CATTAGGAAG
ACGTTTAAGA CCGTGGACAC GGCGTGGAGA GGCATAGGGT TTATACCAAA GTCAGGCCTA
GCGCTAAGAG AGGAGTATGC CAACATAGAC GCAATGCTCC ACTTCGGAAT ACCCGAGCTT
AAGCCAGAGG CGTGGAGAAA GGACCTGCCC CTAAACTGCA GATGTGCAGA GGTCAACTTG
GGCAAGGCCA AGCCTACAGA CTGCCCGCTC TTCATGAAGG CGTGTACCCC CGACAGGCCC
ATAGGGCCCT GCATGGTGTC TATGGAGGGC GCATGCGCCG TGTGGGCGAG GTTCGGAGGC
GGAGGACTCG CAGATGATGT GGCAAGAGAG CTCGGCATTA TATGA
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| Protein sequence | MAEFLFRKNI KMTAQLKDLI AKYAEYLKNK YGRDYVFKIM DFCGTHEWTI VHFGLRSLVP
KNVELVPGPG CPVCVVPSYY IEEAIKLALD GVVIYTYGDA YRLPAIRPVK GVKSLAEAKA
QGADVKVVSH ILQAISLATH NKKPGMFLGI GFETVAPGYA VAILDGKIPE NLKIMSLVKL
TPPAAYLAID TIREKPTDFP IMGVIAPGHV STIIGAKAWT PIAENFGIPV VVAGFEPNDV
LFAIAEVLRQ LKNGESKVVI EYTRAVTWDG DLKAQAAIRK TFKTVDTAWR GIGFIPKSGL
ALREEYANID AMLHFGIPEL KPEAWRKDLP LNCRCAEVNL GKAKPTDCPL FMKACTPDRP
IGPCMVSMEG ACAVWARFGG GGLADDVARE LGII
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