| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pcal_1037 |
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| Symbol | |
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| ID | 4908694 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pyrobaculum calidifontis JCM 11548 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009073 |
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| Strand | - |
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| Start bp | 972219 |
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| End bp | 973448 |
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| Gene Length | 1230 bp |
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| Protein Length | 409 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 640124789 |
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| Product | nucleotidyl transferase |
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| Protein accession | YP_001055928 |
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| Protein GI | 126459650 |
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| COG category | [J] Translation, ribosomal structure and biogenesis
[M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG1208] Nucleoside-diphosphate-sugar pyrophosphorylase involved in lipopolysaccharide biosynthesis/translation initiation factor 2B, gamma/epsilon subunits (eIF-2Bgamma/eIF-2Bepsilon) |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 7 |
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| Fosmid unclonability p-value | 0.0000127553 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGGGCGTTA GAGTTGCCAT TATTCCCGTC GGCGGCGAGG CTGTGCGCCT TCGTCCTCTC
ACGGTTGAGA CGTCGAAGGC GATGGTGAGG TTTCTCAACA GGCCCCTAGT TGAGCTAACG
ATATTACAAC TGGCTCAGCA GGGCGTAGAG GAGGTGTACT TCGGCGTGAG GGGTTACTAC
AACTACCGCG ACATATACGA CTACTTTAGG GAGGGCGCGT GGTTCTATGC GCGGTATGGG
AGAAAAGTCC GCATTAGGTA CATGCCCCGT GTAGAGACTC GGGGCAACGC CGAGGCTGTG
TTGGCCACCA TGGAGTACTA CGACATCAAG GAGCCGGCGC TCGTGGTGCA GGGGGACAAC
GTGTTTAAGC TGGACTTGGA GGAGATGTAT AAAGTACATA GTGAGAAGAG GGCCTTTATC
ACCATTGCCC TCAAGGAGGA GGAGGAGGGC GACTTAAGCG AGTTCGGCGT GGCCGCCGTC
GACGAAGAGA TGCGCATATT GAAGTTCGTG GAGAAGCCGA AGAGGCGGGA GGACGCGCCC
AGCAACTTGG TGAATACTGG GATATACCTC CTCTCGGAGG ACTTCAGAGA CTTCTTCGAG
GGCGAGCTTG GGCAAAAGCT GTACATGGAG GGCAGGCTGG ACTTCGGCGG CGACGTAATA
CCAGCGGTGG TGGCAGCTGG CCTGCCGGTG TACGGCTATG TCACCCGCGG CTATTGGTTC
GACGTGGGGA CTCCCGGCCG GTATCTAAAG GCTGTGCAGT ACCTCTTGGA GAATTTGACG
CCGCAGGAGC TAGAGGCTGA GGAGATAGCG CCGTCTGTAT ACGCCCAGGG AACAAGCAGA
CAGTCAAAGG CGCTGAAGGA GAAGATACGT GCCGACATCG CCAGTGGGGC GGTAAAAATA
GAGGGCCACA TATTAATAGG GCGGCATGTG CACATTGGTG CAAACAGCTA CATCAAGTCC
TCTGTGATAG ACAACTACGT TGTATTGAGA GAAGGGGCCA CCGTCGAAGA CTCAGTGATA
ATGGATAGGT CCTACGTGGG CAGGGGGGCC GTGATTAGGA GATCCATCAT AGGGCGGCAT
GTCTACGTGG GAGAGGGGGC CGTGATAGAA GACTCCGTGA TCGCCGACGA TGCGACAGTT
GGCGATGGGG CTGTGCTGAG GCGCGTGAAG GTGTGGCCTC ACAAGACGTT GGAGAGGGGG
GTCAAGCTCG AGGACTACAA CCTCGTCTAG
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| Protein sequence | MGVRVAIIPV GGEAVRLRPL TVETSKAMVR FLNRPLVELT ILQLAQQGVE EVYFGVRGYY
NYRDIYDYFR EGAWFYARYG RKVRIRYMPR VETRGNAEAV LATMEYYDIK EPALVVQGDN
VFKLDLEEMY KVHSEKRAFI TIALKEEEEG DLSEFGVAAV DEEMRILKFV EKPKRREDAP
SNLVNTGIYL LSEDFRDFFE GELGQKLYME GRLDFGGDVI PAVVAAGLPV YGYVTRGYWF
DVGTPGRYLK AVQYLLENLT PQELEAEEIA PSVYAQGTSR QSKALKEKIR ADIASGAVKI
EGHILIGRHV HIGANSYIKS SVIDNYVVLR EGATVEDSVI MDRSYVGRGA VIRRSIIGRH
VYVGEGAVIE DSVIADDATV GDGAVLRRVK VWPHKTLERG VKLEDYNLV
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