| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pcal_0990 |
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| Symbol | |
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| ID | 4909918 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pyrobaculum calidifontis JCM 11548 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009073 |
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| Strand | + |
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| Start bp | 932977 |
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| End bp | 933774 |
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| Gene Length | 798 bp |
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| Protein Length | 265 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 640124740 |
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| Product | monomeric DNA polymerase sliding clamp |
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| Protein accession | YP_001055881 |
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| Protein GI | 126459603 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0592] DNA polymerase sliding clamp subunit (PCNA homolog) |
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| TIGRFAM ID | [TIGR00590] proliferating cell nuclear antigen (pcna) |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 28 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGTATTATG GGTTCAATTT TTTAAAAAGT GGGCCACCTT ATGTCATGCC TAAGTATGTT
CTAACGTATA TGGACGCCAA GGAGTTCGCG TACATAATAG ACTCACTATC GGTGTTGGTG
GAGGAGGCAA GCTTCGTGCT TAGGAGCGAT GGCCTTTTTC TCCGCGCGTT AGACGCGTCT
AGGACGGCCA TGGTAGACCT CTCTATGCCT AAGGAGGCCT TTGAGGAATT CCCAGAGGTT
GAGGAAGAGG TAAAGCTCGG CTTCAATTTT AAGGATCTTA AGAAGCTACT GCGGCGGGTG
AAGAAGGGCG ACAAGATAAG CCTTGAAATC GAGGAGTCCA GAGTCAAGGT GAAGCTGGTG
GGCAAGTCTG TCAGATCTAT AACTCTCCCC ATGATTGAGG TGGTGTCTGA GGAGCTCCCA
ACGCCTAAGG TGGTCTTCAC GGCGCTTGTC AAAACCAGTA GCGACGTATT GGCCTCTGCT
GTGAAAGACG CAGACGCTGT AGCAGACGAG GTGAAGTTTG AGGCAAACGA GGACGCCTTT
GTAATAAGCG CGGCCAGCGA CAAGGGCGAG GTGGAAGTGC GGCTGGACAA GGGCAGCGAG
CTTGTCTACG AGTTTGACGT AAAGGAGCCG GCCTCGGCCC GCTATTCGCT GGAGTACCTC
GTGGACATCG TGGGCAAGGC GTCTAAAATA AGCGACATAG CCACTGTGGA GTTGGCCACT
GCGAAGCCTG TCTTGCTCAC CTTCGACATA CCGGCCGGCG GCCGAATTGC CTACTACGTG
GCGCCGAGGG TGGAGTGA
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| Protein sequence | MYYGFNFLKS GPPYVMPKYV LTYMDAKEFA YIIDSLSVLV EEASFVLRSD GLFLRALDAS
RTAMVDLSMP KEAFEEFPEV EEEVKLGFNF KDLKKLLRRV KKGDKISLEI EESRVKVKLV
GKSVRSITLP MIEVVSEELP TPKVVFTALV KTSSDVLASA VKDADAVADE VKFEANEDAF
VISAASDKGE VEVRLDKGSE LVYEFDVKEP ASARYSLEYL VDIVGKASKI SDIATVELAT
AKPVLLTFDI PAGGRIAYYV APRVE
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