Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pcal_0892 |
Symbol | |
ID | 4909910 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pyrobaculum calidifontis JCM 11548 |
Kingdom | Archaea |
Replicon accession | NC_009073 |
Strand | - |
Start bp | 849479 |
End bp | 850489 |
Gene Length | 1011 bp |
Protein Length | 336 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 640124641 |
Product | tyrosyl-tRNA synthetase |
Protein accession | YP_001055784 |
Protein GI | 126459506 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0162] Tyrosyl-tRNA synthetase |
TIGRFAM ID | [TIGR00234] tyrosyl-tRNA synthetase |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | 35 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGGCCAGG AAATGCCCAC CTATTTAAAA TTAACACATT TAAGGAGTTG CGTCTCTCTT TGCATGGAGC ACTTACTTAA AAACGTGGAA GAGGTGGTGA CCAAGGAGGA GTTCCTGCGG CTGGGGGGCG GCAGGGCGTA CCTGGGGTTT GAGCCGCTGT GGCCTATACA CGTTGGGTGG TTGGTGTGGG CCTATAAGCT CAGGGAGTTG CAAGAGGCCG GCTTCGACGT GGTGGTGCTC GTCGCCACTT GGCACGCGTG GATAAACGAC AAGGGGAGCT TGGAGGAGCT TAGGCGGCAC GGCGACGAGG TGAGGCAGTT TCTGGGGAAG GTGGCCCAGT TCAAGTACGT CTATGGCGAG GAGTTGGCAA AGGACCCAGC CTACTGGGAG CTAGCGGTGA GGGTGGCCAA GGGGGCCTCG CTTGCGCGCG TGAGGAGGGC CACGCCTGTG ATGGGGAGGC GGGCGGAGGA GGTGGAGTTG GACTTCGCAA AGCTCCTCTA CCCCGTGCTC CAGGTGGCGG ACATCTTCTA CCTAGGCGTC GACGTGGCCG TGGGCGGGGT GGACCAACGT AGGGCGCACA TGTTGGCCAG AGACGTGGCT GAGAAGCTTG GCTTTAAAAA GCCCGTCGCC CTCCACACCC CCATAATAAC TTCGCTCTCG GGCGTGGGGC GGATGGAGGG ATCCCACCGG GAGATCGACG AGGTCTACGC CATGTACAAA ATGTCTAAGT CTAAGCCGCA GAGCGCCATA TTTGTCACAG ACCCGCCTGA GGAGGTGGAG AAGAAGGTCT GGGCCGCCTA CTGCCCTCCC AGGGAGGTGC GCTTCAACCC GGTGTACGAG CTGGCAGCGT ATCTGCTGAT CCCGTACCAC GGGCCGCTGG AGGTGGGCGG CAGGAGGTAC GAGGACCCCC AAGCCCTTGC CAACGACTAC AAAAACGGCG ACGTATCGCC ACAAGCCTTA AAAGACGCCG TCGCCAAGGC GCTTATCGAC ATGTTGGCCA AGCTCAAGTG A
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Protein sequence | MGQEMPTYLK LTHLRSCVSL CMEHLLKNVE EVVTKEEFLR LGGGRAYLGF EPLWPIHVGW LVWAYKLREL QEAGFDVVVL VATWHAWIND KGSLEELRRH GDEVRQFLGK VAQFKYVYGE ELAKDPAYWE LAVRVAKGAS LARVRRATPV MGRRAEEVEL DFAKLLYPVL QVADIFYLGV DVAVGGVDQR RAHMLARDVA EKLGFKKPVA LHTPIITSLS GVGRMEGSHR EIDEVYAMYK MSKSKPQSAI FVTDPPEEVE KKVWAAYCPP REVRFNPVYE LAAYLLIPYH GPLEVGGRRY EDPQALANDY KNGDVSPQAL KDAVAKALID MLAKLK
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