| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pcal_0738 |
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| Symbol | |
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| ID | 4908708 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pyrobaculum calidifontis JCM 11548 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009073 |
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| Strand | - |
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| Start bp | 696663 |
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| End bp | 697742 |
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| Gene Length | 1080 bp |
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| Protein Length | 359 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 640124487 |
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| Product | radical SAM domain-containing protein |
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| Protein accession | YP_001055630 |
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| Protein GI | 126459352 |
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| COG category | [H] Coenzyme transport and metabolism
[R] General function prediction only |
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| COG ID | [COG1060] Thiamine biosynthesis enzyme ThiH and related uncharacterized enzymes |
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| TIGRFAM ID | [TIGR00423] radical SAM domain protein, CofH subfamily |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 4 |
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| Fosmid unclonability p-value | 0.000000230285 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | GTGCTCAAGC CAGAAGACGT GGTGGAGGCC GCCCTTAGGG GGCTCTCTAG GCACGACGCA
GAGGCGCTGA TGCGCGAGGC GGACATGTTC ACGCTGGCCC AGGCCGCCCA CGCCGTCTCG
CAGAAGTTCT ACGGCGACGT GGTGACCTTC GTCAACAACA TCGTGGTGAA CTACAGCAAC
GTCTGTGTGG CCAAGTGCCC CATATGCGCC TTCTACCGCC TGCCGGGGAG CCCCGACGCG
TATGTGCGTA AGCCCGAGGA AGTGGCCGCC GCAGTGAGAC AAGCCGTGGA GCAACGCGGC
GTCACGGAGT TGCACATAAA CGGCGGCTTT AACCCCTTCC TAACCCCCGA GTACTTCGAC
CAGCTGTTCT CCGCCGTCAA GAAGGCCGCC CCCCGCGTGG TAATAAAGGG GCCCACCATG
GCCGAGGTGG ACTACTACGC CAAGCTGTGG CACATGTCTT GGCGAGAAGT CCTCTCCAGG
TGGAAAGACG CGGGGCTAGA CGCCATATCG GGCGGCGGCG CCGAGATATT CGCAGAAGAG
GTGAGGAGGG TGGTGGCGCC ACACAAGATA TCCGGCGAAG AGTGGATCAG GATAGCCGAG
GTGGCCCACG AGCTGGGGAT CCCCAGCAAC GCCACAATGC TCTACGGCCA CGTAGAAGAG
GACCGCCACG TGGTAGACCA CATATTCCGC GTAAAAGAGC TACAGGAAAA GACCGGGAGG
GTACTCCTCT TCATACCCGT GAAGTACAAC CCGCAAAACA CCGAGTTGTA CAAGAGGGGG
GTCGTGAAGG GCCCCGCCCC AGCCACATAC GACGTAAAAG TGGTGGCCAT ATCCCGCCTA
ATCCTCTTAG ACAGGCTAAA GGTAGCCGCC TACTGGCTCT CCGTGGGGAA GAAGCTCGCC
TCCACGCTAC TCCTCGCGGG GGCCAACGAC CTTGTCGGCA CCATGTACAA CGAGGCCGTG
CTGAGGTCGG CCGGGGCGCC CCACTCCGCC ACGCCAGAGG AGCTGGCCGC CATAGCGAGA
GAAGTGGGCA AAAGACCCGC CGAGCGGGAC ACCTTCCACA GAATAATTAG ATATATATAG
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| Protein sequence | MLKPEDVVEA ALRGLSRHDA EALMREADMF TLAQAAHAVS QKFYGDVVTF VNNIVVNYSN
VCVAKCPICA FYRLPGSPDA YVRKPEEVAA AVRQAVEQRG VTELHINGGF NPFLTPEYFD
QLFSAVKKAA PRVVIKGPTM AEVDYYAKLW HMSWREVLSR WKDAGLDAIS GGGAEIFAEE
VRRVVAPHKI SGEEWIRIAE VAHELGIPSN ATMLYGHVEE DRHVVDHIFR VKELQEKTGR
VLLFIPVKYN PQNTELYKRG VVKGPAPATY DVKVVAISRL ILLDRLKVAA YWLSVGKKLA
STLLLAGAND LVGTMYNEAV LRSAGAPHSA TPEELAAIAR EVGKRPAERD TFHRIIRYI
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