| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pcal_0616 |
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| Symbol | |
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| ID | 4910276 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pyrobaculum calidifontis JCM 11548 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009073 |
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| Strand | + |
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| Start bp | 580474 |
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| End bp | 581826 |
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| Gene Length | 1353 bp |
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| Protein Length | 450 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 640124365 |
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| Product | TBP-interacting protein TIP49 |
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| Protein accession | YP_001055509 |
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| Protein GI | 126459231 |
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| COG category | [K] Transcription |
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| COG ID | [COG1224] DNA helicase TIP49, TBP-interacting protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 37 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGTCGGTGA GAATAGAGGA GGTTAAGTCC CAGTTTGAGA GATTTGCCGC GCACAGCCAC
ATAAAGGGCC TCGGAGTAAG GGATGGGAAG GTGGAATTCA TAGCCGACGG CTTCGTCGGC
CAAGTGGAGG CCAGAGAAGC CGCGTACATC GTCGTTAAGA TGATTAGGGA GGGCAAGTTT
GCGGGGAAGG GGGTCTTAAT CGTGGGTCCC CCTGGCACTG GCAAGACCGC GCTTGCCTTG
GGCATAGCTA GGGAGTTGGG CAGGGAGACT CCCTTCGTGG CCCTCTCTGG CGGCGAGATA
TACTCTCTCG AGGTTAAGAA GTCGGAGTTC TTGATGAGGG CGCTTAGGAG GGCCATTGGC
ATCAAGGTGC GGGAGTGGCG TAAGGTGTAC GAGGGGGAGG TTAGGTCCAT AGAATTTAGG
TATGGCAGAC ACCCATATAA CCCCTACATC CAGAGGGTCC TCGGCGCCAC GATAAAGTTG
CGCACTAGGG ACGAGGAGAA GACTCTCCGT GTGCCTGCGG AAATCGCCGA GCAGTTGATA
GAGCTCGGGG TTGAGGAGGG CGACGTCATT ATGATCGACG AGGAGACGGG GGCTGTGTCT
GTAGTTGGCA GGGGAGAGAG CGGCGAGCAG TACGACGTCG CTGTGAGGCG GAGGATTGAG
ATCCCCAAGG GCCCCGTCTA CAAGGAGAAG GAGATTGTGC GGTTTTTCAC TCTCCACGAC
GTGGACGTGT CGCTGGCGAG GCAGAGGGGG CTCATCTCTG CGATGTTGTT TGGCTTTGCG
GAGGAGGTGA AGGAGATACC GGACGAGATT AGGAAGCAGA GTGACGAAAT TGTGAGAAAG
ACGCTGGACG AGGGGAAGGC GGAGCTCGTG CCCGGCGTGT TGTTTATAGA CGACGCCCAT
CTGCTCGACA TTGAGAGCTT CTCCTTCCTA ATGAGGGCCA TGGAGACTGA GTTTGCCCCC
ATCATAATTA TGGCCACGAA TAGGGGGATC GCCAAGATTA GGGGTACCGA CATCGAGGCG
CCGCACGGCA TACCGCAGGA CATGTTGGAC AGGCTCGTCA TCATTAGGAC GAGGCCCTAC
ACCGCCGACG AGATAAGAGA GATTATACGC ATTAAGGCCA GGGAGCAGGG CATATCTCTG
TCAGACGAGG CGTTGAAGCT GCTGACCGAC ATAGGCGTCA ACCACTCCCT CAGGTACGCC
CTCCAGTTGT TAACACCGGC GTACATAATA GCAAAGGAGA GGGGCAAGTC CTCCGTAGAG
AGAGAAGAGG TGGAGTACGT GAGGCGCCAC TTTGTGTCAG TAAAGGAGTC TGTGGAGTAC
GTGAAATCGC TCGAGGAGAA ATTCCTCAAG TAA
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| Protein sequence | MSVRIEEVKS QFERFAAHSH IKGLGVRDGK VEFIADGFVG QVEAREAAYI VVKMIREGKF
AGKGVLIVGP PGTGKTALAL GIARELGRET PFVALSGGEI YSLEVKKSEF LMRALRRAIG
IKVREWRKVY EGEVRSIEFR YGRHPYNPYI QRVLGATIKL RTRDEEKTLR VPAEIAEQLI
ELGVEEGDVI MIDEETGAVS VVGRGESGEQ YDVAVRRRIE IPKGPVYKEK EIVRFFTLHD
VDVSLARQRG LISAMLFGFA EEVKEIPDEI RKQSDEIVRK TLDEGKAELV PGVLFIDDAH
LLDIESFSFL MRAMETEFAP IIIMATNRGI AKIRGTDIEA PHGIPQDMLD RLVIIRTRPY
TADEIREIIR IKAREQGISL SDEALKLLTD IGVNHSLRYA LQLLTPAYII AKERGKSSVE
REEVEYVRRH FVSVKESVEY VKSLEEKFLK
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