Gene Pcal_0608 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPcal_0608 
Symbolupp 
ID4909572 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePyrobaculum calidifontis JCM 11548 
KingdomArchaea 
Replicon accessionNC_009073 
Strand- 
Start bp571445 
End bp572077 
Gene Length633 bp 
Protein Length210 aa 
Translation table11 
GC content54% 
IMG OID640124356 
Producturacil phosphoribosyltransferase 
Protein accessionYP_001055501 
Protein GI126459223 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG0035] Uracil phosphoribosyltransferase 
TIGRFAM ID[TIGR01091] uracil phosphoribosyltransferase 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones35 
Fosmid unclonability p-value1 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCTGTAC GCATTATAGA CCACGTATAT GCCCAACACC TGTTGACAAA GCTAAGGGAC 
AAGTCGACGA AGGGTATAGA GTTTCGTAAA GGCCTTGTTA GACTTGGCAG AATAGTGGGG 
TACGAGCTGG TTAAGACTTT TCCAACGCGG CAGGTGGAAG TAGAGACGCC GCTCGGCAAA 
GCAACCGGCG TTGAAATAGT GGGCTTGGAC AAAGTCGTCA TTGTCCAAAT TCTTAGGGCG 
GCGATGCCCT TCGTAGAGGG GCTTCTAAAG GCTTTTCCAC AGGCGCGTCT CGGCGTAGTT 
GCCGCAAGGC GGAGAGAGGA GGGCGGCGCA ATATCTGTGG AGGTGTTCTA CTCCAAGGTA 
CCCCAGATAG AGGGGGACGT GGTCATAGTG GCGGACCCAA TGTTGGCGAC GGGGGGTACG 
ATGATAAAGG CAATAGAGGA GGTGTACAAG GCTGGGAATC CGCAACGGCT AATAGTGGCG 
TCGGTCATAG CCACTCCCAT AGGCGTAGAC AACGTGCTTT CGAAATATCC GCATGCTGAA 
ATTTACACCG TTGCAATAGA CCCAGCGCTT AACGACAGGG CGTTCATAGT CCCTGGCCTC 
GGCGACGCAG GCGATAGAGC TTTTTCCTCT TAG
 
Protein sequence
MPVRIIDHVY AQHLLTKLRD KSTKGIEFRK GLVRLGRIVG YELVKTFPTR QVEVETPLGK 
ATGVEIVGLD KVVIVQILRA AMPFVEGLLK AFPQARLGVV AARRREEGGA ISVEVFYSKV 
PQIEGDVVIV ADPMLATGGT MIKAIEEVYK AGNPQRLIVA SVIATPIGVD NVLSKYPHAE 
IYTVAIDPAL NDRAFIVPGL GDAGDRAFSS