Gene Pcal_0452 details

Gene Information

• Locus tag: Pcal_0452
• ID: 4910293
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Pyrobaculum calidifontis JCM 11548
• Kingdom: Archaea
• Replicon accession: NC_009073
• Strand: +
• Start bp: 435112
• End bp: 435771
• Gene Length: 660 bp
• Protein Length: 219 aa
• Translation table: 11
• GC content: 55%
• IMG OID: 640124204
• Product: hypothetical protein
• Protein accession: YP_001055351
• Protein GI: 126459073
• COG category: [S] Function unknown
• COG ID: [COG5493] Uncharacterized conserved protein containing a coiled-coil domain

Plasmid Coverage information

• Num covering plasmid clones: n/a
• Plasmid unclonability p-value: n/a
• Plasmid hitchhiking: n/a
• Plasmid clonability: n/a

Fosmid Coverage information

• Num covering fosmid clones: 37
• Fosmid unclonability p-value: 1
• Fosmid Hitchhiker: No
• Fosmid clonability: normal

Sequence

Gene sequence

GTGGAACTTG TGGAGGCGGT AAAGAAGGTG TTGATGGAGA ACCCGTCGAT ACTAGTGGAG 
GTCCTAGTGG CAAAGCCGGA GATCTTGTAC CAAGCCCTGG CAAAGATAGC TCCATGGCAG 
TTGTTAGCCA CGAAAGAGGA CATAAGAAGA CTTGAGGAAA AGATGGCGAC AAAAGAGGAC 
GTAAAAAGGC TGGAGGAGAG AGTGGCGGCT TTGGAACGTA GATTTGATAG TGAGATGCGC 
CGCTTGGAGA CGACTATTAC TGCCCTAGGC GCCAGGTGGG GGGTTCTCAG CGAGGAGGCC 
TTTAGGGAGG GGGTGAGGAG GCTCTTGGCC GAGGCCGGCT GGGCGGTGGA GAAGGTGATG 
TTATTCGACA GAGAGGGGTA CGTCTACGGG GAGCCCTCCG AGGTTGAGTA CGACGTAGTC 
GTGAAAGACG GCAAGACGTT CCTCGTGGAG ATAACCTCTG CCCTCAAGCG CAGCGACTTG 
CCCACGCTGC GGCGGAAGAG GGAGTACTTC GAAAAAGCCA AGGGGGTGAA AGTAGACGCC 
GTCTTTGTAG TGACGCCGTT TATACACGAC AGGGTGCCAG AGAGAGTTAA GGCCATGGCA 
AAGGATATGG GGATAGAGGT GGTATACCCC ACCGACACAT TGTTTGCATC AGCCCTGTAA 

 

Protein sequence

MELVEAVKKV LMENPSILVE VLVAKPEILY QALAKIAPWQ LLATKEDIRR LEEKMATKED 
VKRLEERVAA LERRFDSEMR RLETTITALG ARWGVLSEEA FREGVRRLLA EAGWAVEKVM 
LFDREGYVYG EPSEVEYDVV VKDGKTFLVE ITSALKRSDL PTLRRKREYF EKAKGVKVDA 
VFVVTPFIHD RVPERVKAMA KDMGIEVVYP TDTLFASAL