Gene Pcal_0442 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPcal_0442 
Symbol 
ID4908752 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePyrobaculum calidifontis JCM 11548 
KingdomArchaea 
Replicon accessionNC_009073 
Strand
Start bp425094 
End bp425282 
Gene Length189 bp 
Protein Length62 aa 
Translation table11 
GC content48% 
IMG OID640124193 
Product50S ribosomal protein L24e 
Protein accessionYP_001055341 
Protein GI126459063 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG2075] Ribosomal protein L24E 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones35 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGATCC ACAAGTGCTC CTTCTGCGGC GCCGACATAC CCCCAGGCTA CGGCATAATG 
TACGTAAGAA GCGACGGCAC AGTACAGAGA TTCTGCAGCA GAAAATGCTT CGTAAGCGCA
GTCAAGTACG GGAGAAACCC CAGAAAACTT GCATGGGTAA GAAAGAAAAA AGCCAAAACT
TCAAAGTAG
 
Protein sequence
MKIHKCSFCG ADIPPGYGIM YVRSDGTVQR FCSRKCFVSA VKYGRNPRKL AWVRKKKAKT 
SK