| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pcal_0421 |
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| Symbol | |
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| ID | 4908479 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pyrobaculum calidifontis JCM 11548 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009073 |
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| Strand | + |
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| Start bp | 403447 |
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| End bp | 404235 |
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| Gene Length | 789 bp |
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| Protein Length | 262 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 640124173 |
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| Product | binding-protein-dependent transport systems inner membrane component |
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| Protein accession | YP_001055321 |
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| Protein GI | 126459043 |
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| COG category | [E] Amino acid transport and metabolism
[P] Inorganic ion transport and metabolism |
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| COG ID | [COG1173] ABC-type dipeptide/oligopeptide/nickel transport systems, permease components |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 33 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGCTGAGGG TTGGAGTCCT CATAACAGCC GCGGTGGTGG CCCTCTCTAT CGCGGCCCCG
CTCATCGCGC CGTACGACCC GACCAAGTCC GTGGGCGAGC CCCTGGCGCC CCCCAGCGCG
GCTCACCTCT TTGGCACTGA CAACTTGGGG CGGGACGTCT TTAGCAGAGT CTTGTACGGG
GGGCAAGTGA TCATCGGCGT CTCGCTTCTC GCTACAGCTC TCTCGGCGGC GGTGGGCTTC
CCCCTGGGCC TCTTCTCGGG CTACATGGGC GGGCGGGTGG ACAGAGGGTT GAGCATGGTG
ATGGACAGCA TGTACGCCTT TCCCAGCCTC ATCTTGGCCA TTGCCATAGC CAGCGTCTTG
GGGCCCAGCC CGTTAAACGC CGCAGTGGCC ATCGCCGTTG TGTACGTGCC CACGTATTTT
AGAATGGCGC GCAACGAGAC TATGGTGGTT AAATCCAGCT TGTTCGTTGA GGCGGCCGTG
TCGCTGGGGA TGCCCAGGTG GAAGATTCTC TTCCGCCACA TCTTGCCCAA CCTAGTGCCC
AGCTTCGTTG TCGTGGCCAC GATCAATATC GCAGACGCCG CGTTGACCGA GTCTGCCTTG
GCGTTCTTTG GCTACACAGT GACGCCGCCT ACCCCGGACT GGGGGCTTGA CCTCTCCAGC
GCGAGGTCTT ACATTGTGAA TGGGGCGTGG TGGCTCTTGG CCCCCGGCTT CTTCATAATA
TTGACCGCCC TGGGTTTTTC ACTGATGGGG GAGGGTCTTG GGGAGAGAGT GGGTAAAAAA
GAGTGGTGA
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| Protein sequence | MLRVGVLITA AVVALSIAAP LIAPYDPTKS VGEPLAPPSA AHLFGTDNLG RDVFSRVLYG
GQVIIGVSLL ATALSAAVGF PLGLFSGYMG GRVDRGLSMV MDSMYAFPSL ILAIAIASVL
GPSPLNAAVA IAVVYVPTYF RMARNETMVV KSSLFVEAAV SLGMPRWKIL FRHILPNLVP
SFVVVATINI ADAALTESAL AFFGYTVTPP TPDWGLDLSS ARSYIVNGAW WLLAPGFFII
LTALGFSLMG EGLGERVGKK EW
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