Gene Pcal_0357 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPcal_0357 
Symbol 
ID4908487 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePyrobaculum calidifontis JCM 11548 
KingdomArchaea 
Replicon accessionNC_009073 
Strand
Start bp342929 
End bp344086 
Gene Length1158 bp 
Protein Length385 aa 
Translation table11 
GC content62% 
IMG OID640124109 
Productmetallophosphoesterase 
Protein accessionYP_001055258 
Protein GI126458980 
COG category[L] Replication, recombination and repair 
COG ID[COG0420] DNA repair exonuclease 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones36 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGGTAT TGCACATCTC AGACGCCCAC CTCGGCCGGG CTCAGTACCA CCTGCCTGAG 
AGAGAGGAGG ACTACTTCGA GGCGTTCAGA GAGGCAATCC GCCTGGGCAA GTCCGCAGAC
GCCGTCCTCG TCACGGGGGA CCTCTTTGAC CTAAAACGGC CCTCCACCAA GACCCTTGTA
AAATTTGTAG AAGTGGTGGA GCAGGTGGAA GTCCCCATTT TGCTCATAGG GGGCAACCAC
GACTTCTCCT ACACGCGGTT TAGGGCTGAG GCTGGGCGTT GCGTTGCGCC TAAGGAGTGC
CTCTACGACA CCGCGCTTAG GCTTATAGAC AAGCTGGGCT TGGCGAGGCT GCTTTGCTGG
GAGGCGGCCG ACTTGGGCGG GGTTACGGTC TTTGGGGCAT GCGCCACGCC GAGGGAGTAC
GCCCAGGAGT ATCGACAGCT TCTGCAGAGG GCCCCTCCTC GCTCCATCCT AGCCATACAC
CAGGCGATAG AGGGGGTGAA GGCGCGGTAC CCAGTGGAGG AGGACGACTT CTCCATGCCC
CCCGCGGTCT TCCAGGGCCT CTCCTTCTTA CACATAGCCG CCGGCCACGT CCACGACCAC
TTGGCCAGCC ACCCAGTGGG AGCCCTCTGG GCCGGCTCTC TTGAGCTTTG GGACGCTGGG
GAGTTTGAGA CTTGGGACTA CGGAGGGAGT TTTGAGAAGA CGCAAGACGC CGCGGCTAAG
GGCGCCGTGT TGATAGACGC CGCTGGCAGA GCTGTTACAA CAAGGCCGTT GCCCATTAGG
CCGAGGCGGC CCATGTACCG GGTTAGGCTC TACTTCCGCG ACTCCAAGGA GCTGGAGGCG
GCCGTGGAAG AGGCCGTAAA GATGTTCGAC AGACCCGGTG CAGTGGTCCG GCTTGAGCTT
TACGGCGAGG CGGAGGCGCG GCCCCGGCAG ATAGCGGCCC GTTTTTCAAA GGCGCTCCAC
GTAGATGTGG TAGACAGAAC GTCGAGGGGG ATCCAGAGGG CGGTGGCCCC CAGGGGGGCT
GCCTTTGAGG AGATCTGGCG CCTCATGCGC GAGAGGCTGG GGCCCCACGC AGAGGCCGTG
CTAAGGGCCA TGGAGCTTGT GCGAGAGGGG GAGCGCGAGG CGGCGTATAG GCTGTTGCTA
AAGGCCATCT ATGATTAA
 
Protein sequence
MKVLHISDAH LGRAQYHLPE REEDYFEAFR EAIRLGKSAD AVLVTGDLFD LKRPSTKTLV 
KFVEVVEQVE VPILLIGGNH DFSYTRFRAE AGRCVAPKEC LYDTALRLID KLGLARLLCW
EAADLGGVTV FGACATPREY AQEYRQLLQR APPRSILAIH QAIEGVKARY PVEEDDFSMP
PAVFQGLSFL HIAAGHVHDH LASHPVGALW AGSLELWDAG EFETWDYGGS FEKTQDAAAK
GAVLIDAAGR AVTTRPLPIR PRRPMYRVRL YFRDSKELEA AVEEAVKMFD RPGAVVRLEL
YGEAEARPRQ IAARFSKALH VDVVDRTSRG IQRAVAPRGA AFEEIWRLMR ERLGPHAEAV
LRAMELVREG EREAAYRLLL KAIYD