Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pcal_0341 |
Symbol | |
ID | 4908243 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pyrobaculum calidifontis JCM 11548 |
Kingdom | Archaea |
Replicon accession | NC_009073 |
Strand | - |
Start bp | 324651 |
End bp | 325385 |
Gene Length | 735 bp |
Protein Length | 244 aa |
Translation table | 11 |
GC content | 57% |
IMG OID | 640124092 |
Product | hypothetical protein |
Protein accession | YP_001055242 |
Protein GI | 126458964 |
COG category | [R] General function prediction only |
COG ID | [COG0730] Predicted permeases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | 30 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTTTGTTC CCTTTCTGGC AGGCCTCTTG GGGGGCCTTC TGGGTCCCCT TATTGGAGTT GGCGGCGGCG TCGTGATTGT GCCTTTGTTG AACTTTTCTG GAGCCTCCTT CCAGTCGGCG GTGGCGGCTA GCCTATTCTC TATTGTAGTG ACGTCTTTGA CTTCCATTTT TAACTACCGT GGGCTGTTGA ATTTCCGCCT GTTGTGGAGG TACATGGCCC TCTCGGCGTC TGCCGCAGTT TTAAGCGCTT TGGCGTCTGT CAAATATTCG GGGGAGTGGG TGAAGCTGGC TTATGGCGTC TACCTAATCG TGGTGGGGGT GGTTCTGCTT GTCGAGGCTA GGCCGAGGAG GAGGGCCCCT GTCCTCGGCT ACTTGCTCAT TTTCGCTGGT GGGCTTGCCT CTGCCTTGTT CGGGGTCGGG GGAGGGACTG TGTTTGTGCC GGCTTTAGTC TTGGCTATGG GCTTCGACGC CAAGGCGGCC GCGGCGTCTA GCATGGGCAT TATTCTGCCT ACTGCGGTTG CGTCCACTCT CATGTATGCC TCTCTCGGCG TGTTGGATGT GGTGCTGGGG GTGGCCGTTG CCTTGGGTAG CTTCATCGGC GCCTTCGTCG CCAGTAGGTA CATAATGCCG AGGCTGAAGT CGCAACACGT TAGAAAAATG TTTGTTGGCT ATGTCTTCGC AGTGGGGGCC TACTACTTGT TCTCCACCGG CGCTCTCCTC TTCAGCAGGA CATAA
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Protein sequence | MFVPFLAGLL GGLLGPLIGV GGGVVIVPLL NFSGASFQSA VAASLFSIVV TSLTSIFNYR GLLNFRLLWR YMALSASAAV LSALASVKYS GEWVKLAYGV YLIVVGVVLL VEARPRRRAP VLGYLLIFAG GLASALFGVG GGTVFVPALV LAMGFDAKAA AASSMGIILP TAVASTLMYA SLGVLDVVLG VAVALGSFIG AFVASRYIMP RLKSQHVRKM FVGYVFAVGA YYLFSTGALL FSRT
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