| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Patl_4195 |
|---|
| Symbol | |
|---|
| ID | 4175984 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudoalteromonas atlantica T6c |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008228 |
|---|
| Strand | - |
|---|
| Start bp | 5053327 |
|---|
| End bp | 5053779 |
|---|
| Gene Length | 453 bp |
|---|
| Protein Length | 150 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 43% |
|---|
| IMG OID | 638057231 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_663748 |
|---|
| Protein GI | 109900493 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 22 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGCTAGTTC AGTTTCACAA AGTGAGAGGT AAGTGCCACG TAACGCTTAA CTCACTGCAA
AATTACAAAG AGAACTTAAT GACTAAAATT ATCACACTAG TAACCGCCCT ATTTTTGACC
ATATCGTTAG GAACCGCCTC AGCAGGTGTT TACAGCTCAA GCGATGTACT TAATCAAGCC
CATTATCAAT TCAATAAGCA GCAAGTGTTA TCCATGGTTG ATAGCAGCGA AGTACAAGCT
CAACTCGAGG CGCTAGGTGT AAGCACAGCT GACGCAAAGA GTCGTATCAA CCATATGACA
CAAAATGAAT TAAACGCATT GAACGAGCAA ATGAACAATA TGCCAGCTGG TGGCATTGTA
GGGGCTATTG TGACCGTTCT TGCCGTGGTT GCTTTACTCG ATTTACTCGG CGTAACAGAT
GTGTACCCGT TTATTCGCCC CATCAACAGC TAG
|
|---|
| Protein sequence | MLVQFHKVRG KCHVTLNSLQ NYKENLMTKI ITLVTALFLT ISLGTASAGV YSSSDVLNQA
HYQFNKQQVL SMVDSSEVQA QLEALGVSTA DAKSRINHMT QNELNALNEQ MNNMPAGGIV
GAIVTVLAVV ALLDLLGVTD VYPFIRPINS
|
|---|
| |