| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Patl_4180 |
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| Symbol | |
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| ID | 4175969 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudoalteromonas atlantica T6c |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008228 |
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| Strand | - |
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| Start bp | 5033969 |
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| End bp | 5035573 |
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| Gene Length | 1605 bp |
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| Protein Length | 534 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 638057216 |
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| Product | ABC transporter related |
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| Protein accession | YP_663733 |
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| Protein GI | 109900478 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0488] ATPase components of ABC transporters with duplicated ATPase domains |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.0101186 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TTGATATCTA CCGCAAACAT CACCATGCAA TTTGGCGCTG AGCCTTTATT TGAAAACATT
TCGGCCAAAT TTGGTCACGG TAATCGTTAC GGCCTTATTG GTGCAAACGG CTGCGGCAAG
TCGACTTTTA TGAAGATCCT AAGTGGGGAT TTAGTGCCTT CATCTGGCAA TATTTCCATT
ACTCCTGGTG ATAAGCTAGG TATTTTGAGC CAGAATCAGT TCGCTTTTGA AGAATATAGT
GTTGTAGATG CTGTGATTAT GGGCGATTCA GCCTTGTGGA AAGTTAAACA GCAACGAGAT
GAAATTTACG CCAAGCCTGA AATGTCAGAA GAAGATGGCA TGTTAGTCGC ACAGCTTGAA
ACAGATTTCG CTGAGATGGA CGGTTACACT GCAGAAGCCC GCGCTGGTGA CATTCTGTTA
GAGGCAGGTA TCGCTGAGCA CTACCACTAT GGCCTAATGA GCCAAGTGGC ACCCGGTTGG
AAGTTACGAG TACTACTTGC TCAAGCATTG TTTTCAAACC CAGATATTCT GTTATTGGAT
GAGCCTACCA ACAACTTGGA TATTTACACC ATTTCTTGGT TGGCTGATGT GCTAAATCAG
CGTAAATGCA CCATGATCAT TATTTCTCAC GATCGCCATT TTTTGAACTC GGTTTGTACA
CACATGGCTG ACATCGATTA TGGTGAGTTG CGTATTTACC CGGGAAATTA CGAAGCCTTT
ATCGAGGCGT CATCTTTGAT TCAAGAGCAA CTGTTAACCA GTAACGCCAA GAAAACCGCT
GAAATGGAAG ACTTACAAGG CTTCGTTGCG CGTTTCTCGG CTAATGCATC AAAAGCCAAA
CAGGCCAGTT CTCGTGCCAA ACGTTTAGAA AAAATTCAGT TAGATGAGGT GAAGTCTTCC
AGTCGCCGTA CGCCATCAAT CACGTTGAAG CAGCACCGTA AGTTACATCG CCAAGCCTTG
ATTTTAGAGA ACTTTGGTCA CGGTTTTGAC GGTGAGTCAT TGTTTAGTGG TGGCGAGTTG
ATCCTAGAAG CTGGCGCTCG ATTAGCCATA ACCGGTGAAA ACGGCGTGGG CAAAACGACT
TTTCTACGCT GCTTGGTAGA CGAGCTTAAA TTGAATGAGG GCACCATCAA GTGGTCAGAA
AATGCTGTTG TTGGTTATTG CCCACAAGAC AGCTCGGCAG ATTTTGCCAT GGATATCACT
TTGTTTGATT GGATGTCTCA GTGGCGCACT CCTAAGCATG ATGACTTAGC GGTTCGAGCA
ATGTTAGGTC GCTTATTGTT TAGCGCAGAT GATTTCAACA AAAAAGTGAA CGTGTGCTCA
GGTGGTGAGA AAAACCGCTT ATTGTTTGGC AAGTTGATGA TGTCTGATAT CAACGTACTG
ATCATGGATG AGCCAACGAA TCACATGGAT ATGGAAGCAA TCGAAGCACT TAATTCGGCG
CTTAAAAAAT TCGATGGGAC CTTAATTTTC GTAAGTCACG ACCGGGAGTT TGTATCCTCT
TTAGCTACCC GCGTTATTGA GATCAAGGAC AGAGAAGTGA TTAACTTCCA AGGTACGTAT
GATGAGTACT TCGCAAGCCG TCAAGAGACA AGCGCCGCTG CATAG
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| Protein sequence | MISTANITMQ FGAEPLFENI SAKFGHGNRY GLIGANGCGK STFMKILSGD LVPSSGNISI
TPGDKLGILS QNQFAFEEYS VVDAVIMGDS ALWKVKQQRD EIYAKPEMSE EDGMLVAQLE
TDFAEMDGYT AEARAGDILL EAGIAEHYHY GLMSQVAPGW KLRVLLAQAL FSNPDILLLD
EPTNNLDIYT ISWLADVLNQ RKCTMIIISH DRHFLNSVCT HMADIDYGEL RIYPGNYEAF
IEASSLIQEQ LLTSNAKKTA EMEDLQGFVA RFSANASKAK QASSRAKRLE KIQLDEVKSS
SRRTPSITLK QHRKLHRQAL ILENFGHGFD GESLFSGGEL ILEAGARLAI TGENGVGKTT
FLRCLVDELK LNEGTIKWSE NAVVGYCPQD SSADFAMDIT LFDWMSQWRT PKHDDLAVRA
MLGRLLFSAD DFNKKVNVCS GGEKNRLLFG KLMMSDINVL IMDEPTNHMD MEAIEALNSA
LKKFDGTLIF VSHDREFVSS LATRVIEIKD REVINFQGTY DEYFASRQET SAAA
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