| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Patl_4172 |
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| Symbol | |
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| ID | 4175961 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudoalteromonas atlantica T6c |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008228 |
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| Strand | - |
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| Start bp | 5022756 |
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| End bp | 5023922 |
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| Gene Length | 1167 bp |
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| Protein Length | 388 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 638057208 |
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| Product | hypothetical protein |
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| Protein accession | YP_663725 |
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| Protein GI | 109900470 |
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| COG category | [S] Function unknown |
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| COG ID | [COG5505] Predicted integral membrane protein |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.000960733 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGATCACGA CTGCCTTTGC ATACATCAGT GTTTTACTCT TTATCGCGGG GGGACTAGCC
CTAGTAGAAG AGAAAACCCG TTGGAAGTTA TTCCATTATC TACCCGCCAT CGTATTGCTG
TATTTCACAG TCATGATGAT GTCTACGCTG GGTTTATGGA GTAAAACAGC AGAGATCAAT
CAGGCGTATT CTTCCCTTAA GGCAAATATT CTTCCGGCTA TGATCTTCTT AATGTTGCTG
GACGCTGATT TACGTCAAAT TAAACGCTTG GGCGGCAAGA TGCTGTTGGC ATTTTTTGCC
GCAGCGATCA GCATTGGTTG TGCATTTGTC ATTGGTTTTG CGCTATTTAA AGGCTTTTTA
GCCCCAGATG CGTGGAAAAC GCTAGCGGCG CTAAGCGGCA GTTGGATGGG CGGCACAGGT
AATATGGCTG CGGTGCAAGC GGCGCTTAAT GTGCCTGATT CCAGTATGGG TTACACCTTG
CTAATTGACT CAATTGATTA CGCCATGTGG GTCATGTTTC TGTTGGCGTT AGTTCCTTTC
GCGAATCGCT TCAATCATTG GACTAAAGCT GATGGTAAAG CCTTAGCAGA AGTCAGTGCC
AATTTAGCCA GTAAACAACA GGAATACACA GGCAATAAAA CCACCTCTAT GTTGGTTTTG
CTGTCTGGGG CAATGTTGGT GTCCATCCTA TGTCAACATC TTGCTGCTGC TTTGCCTGTG
ACAGAATTTT TTACTAAAAC CGCATGGACT GTGATGTTGG TCACCGTTTT GGGTGTTATT
TGTGCAATCA CTCCCATCAG CAAAATGTGG GGGGGGAAAG AGTTATCATC CCTCATGCTG
TATCTCATTA TCGGCTTGAT TGCTTCGCGT GCTAATTTCA ACGAATTAAC CCAAGCGCCT
ATATATATCT TGCTTGGCTT ATTTATTTTG GCTGTACATG GTGGGCTTAT GCTACTGGTG
GCCAAGCTGT TCAAACTTGA TTTATTCACC TGCGGTATCG CATCGTTGGC CAATATTGGC
GGCGTGGCAT CTGCTCCTAT ACTTGCTGCT GCTTATTCTC GAGCGTTAAT CCCTGTGGGC
GTGTTAATGG CCATGTTGGG TTACATAGTT GGCACCGGCG GCGGCTTATT GGTAGGGCGA
GCGTTAGCAT GGCTAAGCGC AGCGTAA
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| Protein sequence | MITTAFAYIS VLLFIAGGLA LVEEKTRWKL FHYLPAIVLL YFTVMMMSTL GLWSKTAEIN
QAYSSLKANI LPAMIFLMLL DADLRQIKRL GGKMLLAFFA AAISIGCAFV IGFALFKGFL
APDAWKTLAA LSGSWMGGTG NMAAVQAALN VPDSSMGYTL LIDSIDYAMW VMFLLALVPF
ANRFNHWTKA DGKALAEVSA NLASKQQEYT GNKTTSMLVL LSGAMLVSIL CQHLAAALPV
TEFFTKTAWT VMLVTVLGVI CAITPISKMW GGKELSSLML YLIIGLIASR ANFNELTQAP
IYILLGLFIL AVHGGLMLLV AKLFKLDLFT CGIASLANIG GVASAPILAA AYSRALIPVG
VLMAMLGYIV GTGGGLLVGR ALAWLSAA
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