Gene Patl_3970 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPatl_3970 
Symbol 
ID4175750 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudoalteromonas atlantica T6c 
KingdomBacteria 
Replicon accessionNC_008228 
Strand
Start bp4781225 
End bp4782016 
Gene Length792 bp 
Protein Length263 aa 
Translation table11 
GC content45% 
IMG OID638056998 
Productmethyltransferase small 
Protein accessionYP_663524 
Protein GI109900269 
COG category[R] General function prediction only 
COG ID[COG4123] Predicted O-methyltransferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAGCGCC AAGGGTTTCA ATTTAAACAG TTCTTTATTG AGCATCAAGA TTGCGCCATG 
AAAGTCGGCA CCGACAGCAT CATGCTCGGC AGTTGGGTGA CCGGGGGTGA TTTAATAAAT
GCCTCAGAGA CACAAAGATT CCTAGACATA GGAACGGGTA GCGGCTTGTT AGCTATTATG
CTGGCCCAAA AAAGCAGTGA ACAAACCCAT ATTAGCGGAA TTGATATCGA TAAGGATGCT
ATTGGTCAGG CCACACGTAA TATGGCCAAC AGCCCTTGGT CGCATAGACT CGATGCGCAG
CAAGCCAGTG TGCAATCATT CACACAAAAC TGTGATAACC CCAAATTTGC CCTTATCATC
AGTAATCCAC CGTATTTTAA CAGCCCGATT CTAACGCATG AAAAACAGGC CCAGAAACGC
GTGGCCGCGA GGCAAACCAG TGAGCTAACA CATCACACGC TACTCAATAA TGTGGTGCGA
TTGCTTGCCC CCTCAGGTGT GTTTTACTGT GTTTTACCCA GCGATGTTAG CCAAGCATTT
ATTGAATTGG CAGACCCGTT AGGGTTAAGT TTAATAAAGC AGTTAACGGT GTTTTCTAAA
CCCGATACAA ATGCCCTTCG AGAACTACTT GCCTTTCGCT TTAATGACCC TTCCTGTATA
CGCGACACCA TTAGCCGTGC CCTTACTAGC CCTGAGCCAC CGACCCGTGA CACCTTGACT
ATTTATACAC AAAGTCACCA ATATTCAGAC CAATACAAAG CACTTTGCAA AGACTATTAC
TTAAATTTTT AG
 
Protein sequence
MKRQGFQFKQ FFIEHQDCAM KVGTDSIMLG SWVTGGDLIN ASETQRFLDI GTGSGLLAIM 
LAQKSSEQTH ISGIDIDKDA IGQATRNMAN SPWSHRLDAQ QASVQSFTQN CDNPKFALII
SNPPYFNSPI LTHEKQAQKR VAARQTSELT HHTLLNNVVR LLAPSGVFYC VLPSDVSQAF
IELADPLGLS LIKQLTVFSK PDTNALRELL AFRFNDPSCI RDTISRALTS PEPPTRDTLT
IYTQSHQYSD QYKALCKDYY LNF