Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Patl_3970 |
Symbol | |
ID | 4175750 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudoalteromonas atlantica T6c |
Kingdom | Bacteria |
Replicon accession | NC_008228 |
Strand | + |
Start bp | 4781225 |
End bp | 4782016 |
Gene Length | 792 bp |
Protein Length | 263 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 638056998 |
Product | methyltransferase small |
Protein accession | YP_663524 |
Protein GI | 109900269 |
COG category | [R] General function prediction only |
COG ID | [COG4123] Predicted O-methyltransferase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAGCGCC AAGGGTTTCA ATTTAAACAG TTCTTTATTG AGCATCAAGA TTGCGCCATG AAAGTCGGCA CCGACAGCAT CATGCTCGGC AGTTGGGTGA CCGGGGGTGA TTTAATAAAT GCCTCAGAGA CACAAAGATT CCTAGACATA GGAACGGGTA GCGGCTTGTT AGCTATTATG CTGGCCCAAA AAAGCAGTGA ACAAACCCAT ATTAGCGGAA TTGATATCGA TAAGGATGCT ATTGGTCAGG CCACACGTAA TATGGCCAAC AGCCCTTGGT CGCATAGACT CGATGCGCAG CAAGCCAGTG TGCAATCATT CACACAAAAC TGTGATAACC CCAAATTTGC CCTTATCATC AGTAATCCAC CGTATTTTAA CAGCCCGATT CTAACGCATG AAAAACAGGC CCAGAAACGC GTGGCCGCGA GGCAAACCAG TGAGCTAACA CATCACACGC TACTCAATAA TGTGGTGCGA TTGCTTGCCC CCTCAGGTGT GTTTTACTGT GTTTTACCCA GCGATGTTAG CCAAGCATTT ATTGAATTGG CAGACCCGTT AGGGTTAAGT TTAATAAAGC AGTTAACGGT GTTTTCTAAA CCCGATACAA ATGCCCTTCG AGAACTACTT GCCTTTCGCT TTAATGACCC TTCCTGTATA CGCGACACCA TTAGCCGTGC CCTTACTAGC CCTGAGCCAC CGACCCGTGA CACCTTGACT ATTTATACAC AAAGTCACCA ATATTCAGAC CAATACAAAG CACTTTGCAA AGACTATTAC TTAAATTTTT AG
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Protein sequence | MKRQGFQFKQ FFIEHQDCAM KVGTDSIMLG SWVTGGDLIN ASETQRFLDI GTGSGLLAIM LAQKSSEQTH ISGIDIDKDA IGQATRNMAN SPWSHRLDAQ QASVQSFTQN CDNPKFALII SNPPYFNSPI LTHEKQAQKR VAARQTSELT HHTLLNNVVR LLAPSGVFYC VLPSDVSQAF IELADPLGLS LIKQLTVFSK PDTNALRELL AFRFNDPSCI RDTISRALTS PEPPTRDTLT IYTQSHQYSD QYKALCKDYY LNF
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