| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Patl_3920 |
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| Symbol | |
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| ID | 4175700 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudoalteromonas atlantica T6c |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008228 |
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| Strand | - |
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| Start bp | 4731004 |
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| End bp | 4731717 |
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| Gene Length | 714 bp |
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| Protein Length | 237 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 638056948 |
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| Product | two component transcriptional regulator |
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| Protein accession | YP_663474 |
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| Protein GI | 109900219 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGTGTGG TTATGTCTCA ACGTATTGCG CTAGTGGAAG ACGATCTCGC TATTCGAGAA
AACTATGCCG CAGCCCTCAA AAAACAAGGA TACGAGGTTA TCTGTTATGC CAATCGCCGG
CAGGCTGAGC AAGGTTTTGC TCAGCGCCTG CCTGACTTGG CGATCATTGA TATTGGATTA
CAGGACGAGA TCGATGGCGG CTTTATGGTT TGCCAGCAAT TACGCAGTTT ATCCAAAACC
TTGCCGATCA TTTTCTTCAC TGCCAGAGAT AACGACTACG ACACCATTTG CGGTTTACGC
ATGGGGGCAG ACGACTACCT AACAAAAGAC ATTAGTTTGC CTCATTTGTT GGCGCGCATC
GCTGCCTTGT TTCGCCGTGT GGCGCTGTTG AATCAACCCC AATTGTCAGA GGACGTAATA
CAGACAGGTG AATTAAGTAT CGACAGCAAG CGCATGACCG TCAGTTGGCA AACACAAGGC
ATTGAGCTAA CAGTGACTGA ATTTTGGATG CTACACGCCA TTGCCAAGTA TGCAGGGCAT
GTTAAAAGCC GCCAACAGTT GATGGATGAG TCAAAAATGG TGGTAGATGA CAGTACTATT
ACGTCGCACA TCAAACGTAT TCGCAAGAAA TTCCAGCAAG TCGACAGTCA GTTTGATCGT
ATTGAAACGG TTTATGGCAT GGGTTATCGC TGGAAAAATG GCATGAGCCA TTAA
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| Protein sequence | MSVVMSQRIA LVEDDLAIRE NYAAALKKQG YEVICYANRR QAEQGFAQRL PDLAIIDIGL
QDEIDGGFMV CQQLRSLSKT LPIIFFTARD NDYDTICGLR MGADDYLTKD ISLPHLLARI
AALFRRVALL NQPQLSEDVI QTGELSIDSK RMTVSWQTQG IELTVTEFWM LHAIAKYAGH
VKSRQQLMDE SKMVVDDSTI TSHIKRIRKK FQQVDSQFDR IETVYGMGYR WKNGMSH
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