| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Patl_3887 |
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| Symbol | |
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| ID | 4175667 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudoalteromonas atlantica T6c |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008228 |
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| Strand | - |
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| Start bp | 4683722 |
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| End bp | 4684630 |
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| Gene Length | 909 bp |
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| Protein Length | 302 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 638056915 |
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| Product | amidohydrolase 2 |
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| Protein accession | YP_663441 |
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| Protein GI | 109900186 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG3618] Predicted metal-dependent hydrolase of the TIM-barrel fold |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.542754 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGCGCAT TTAACAAAGA TGCTGATTGG CTAGATTGGC ATCCGTCCCC CTCCAAACCA
AAATTTGTTG TGCCTAATGG CGCGGTGGAT GCCCATTGCC ATGTATTTGG TCCTGGTGCT
GAATTTCCGT TTGCTCCTCA GCGCAAATAC ACCCCTTGCG ATGCGTCCAA AAAACAACTA
TGGGCATTAC GAGACTACTT GGGTTTTAGT CGTAACGTAG TCGTCCAAGC GACGTGCCAT
GGGGCAGACA ATAGAGCTCT CGTCGATGCA CTGCTGGCTT CCAATGGTCT AGCTAGAGGT
GTGGCCACTG TTTCGGAAGA CGTGACAGAT ACTGAGCTTG ACGCACTTCA CCAAGCCGGC
GTAAGAGGCG TGCGATTTAA CTTTGTTAAG CGTTTAGTTG ATGCTTTACC TTTTGATTCC
TTAAAGCGCA TTGCTGCGAG AATTAAGGAG CTAAATTGGC ACATTGTTAT TTATTTTGAA
GGTCAGGAAC TGCCAGAGCT TTATGACTTC TTTACGAGTT TACCAACTAC TGTGGTAGTC
GATCATATGG GACGACCTGA CGTTACTAAG CCTCTGGATG GTCCTGAATT TTCGCTGTTT
CTAAAATTGA TGCGTGAAAA CGAAAATTTT TGGTCAAAGG TTAGTTGTCC AGAGCGTATA
TCAGTTGCCG GACCATCAAA GCATTATATG GATGTTATCC CATTCGCCCG CACCGTAGTG
GAGCAGTTTT CACAGCGCGT ATTGTGGGGG ACTGATTGGC CGCATCCAAA TATGAAAACG
CACATGCCTG ATGATGGTCA ATTAGTCGAC ATTATTCCGC TTATTGCCCC GACAACTGAA
TTGCAACAGA AGTTGCTTAT CAGTAACCCA ATGCGCCTTT ACTGGCCTGA ACAGAGCATT
AAATCTTAA
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| Protein sequence | MSAFNKDADW LDWHPSPSKP KFVVPNGAVD AHCHVFGPGA EFPFAPQRKY TPCDASKKQL
WALRDYLGFS RNVVVQATCH GADNRALVDA LLASNGLARG VATVSEDVTD TELDALHQAG
VRGVRFNFVK RLVDALPFDS LKRIAARIKE LNWHIVIYFE GQELPELYDF FTSLPTTVVV
DHMGRPDVTK PLDGPEFSLF LKLMRENENF WSKVSCPERI SVAGPSKHYM DVIPFARTVV
EQFSQRVLWG TDWPHPNMKT HMPDDGQLVD IIPLIAPTTE LQQKLLISNP MRLYWPEQSI
KS
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