| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Patl_3886 |
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| Symbol | |
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| ID | 4175666 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudoalteromonas atlantica T6c |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008228 |
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| Strand | - |
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| Start bp | 4683326 |
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| End bp | 4683712 |
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| Gene Length | 387 bp |
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| Protein Length | 128 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 638056914 |
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| Product | protocatechuate 4,5-dioxygenase subunit alpha |
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| Protein accession | YP_663440 |
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| Protein GI | 109900185 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | [TIGR02792] protocatechuate 4,5-dioxygenase, alpha subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGTCTTTAG ATAAGCCTTA TCAAAAAATC CCTGGTACTA CCGTATTTGA TGCGGAAATG
GGGCGGCGTG GTTATCACCT AAATCAATTT TGTATGTCGT TAATGAAAGC TGAAAATCGG
GCTTTATTCA AAGCAGACGA GCGTGCTTAT TTAGATAAAT GGGATATGAC AGAAGAACAA
AAGCAAGGTG TCCTTTCTCG TGATTACAAT CGCATGATGG CAAGCGGCGG GAATATCTAT
TTCCTGGCTA AAATATTCTC CAGCGATGGG CTTAGTTTTC AGTTTGCAGC GGCTACCATG
ACAGGCATGA GTCAACCTGA TTATGCACAA ATGATGCTTG ATGGTGGGCG CGCCCCCGAA
GGCAACATGT TCGAAGGAGA TAAATAA
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| Protein sequence | MSLDKPYQKI PGTTVFDAEM GRRGYHLNQF CMSLMKAENR ALFKADERAY LDKWDMTEEQ
KQGVLSRDYN RMMASGGNIY FLAKIFSSDG LSFQFAAATM TGMSQPDYAQ MMLDGGRAPE
GNMFEGDK
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