| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Patl_3871 |
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| Symbol | |
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| ID | 4175651 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudoalteromonas atlantica T6c |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008228 |
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| Strand | + |
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| Start bp | 4664383 |
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| End bp | 4664595 |
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| Gene Length | 213 bp |
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| Protein Length | 70 aa |
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| Translation table | 11 |
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| GC content | 40% |
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| IMG OID | 638056899 |
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| Product | XRE family transcriptional regulator |
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| Protein accession | YP_663425 |
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| Protein GI | 109900170 |
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| COG category | [K] Transcription |
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| COG ID | [COG1476] Predicted transcriptional regulators |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.0238675 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | GTGGCAAATG TTCCAATCAA AAATAAGATC CGAGAGTTAC GTTTTTTTGC TGATGAAATG
ACCCAAAAAG AGTTGGCAGA ATTGGTCGGG GTGACCCGCC AAACGATCAT GGCAATAGAA
AAAAGTAAGT ATTCACCAAC TTTAGAGGTT GCCTTCAAAA TTGCCGAAGT ATTTGGTCAG
TCGCTAGAAG AAGTTTTTCA ATACGAAGGG TAA
|
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| Protein sequence | MANVPIKNKI RELRFFADEM TQKELAELVG VTRQTIMAIE KSKYSPTLEV AFKIAEVFGQ
SLEEVFQYEG
|
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