| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Patl_3789 |
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| Symbol | |
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| ID | 4175569 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudoalteromonas atlantica T6c |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008228 |
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| Strand | + |
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| Start bp | 4563405 |
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| End bp | 4563908 |
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| Gene Length | 504 bp |
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| Protein Length | 167 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 638056817 |
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| Product | putative lipoprotein |
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| Protein accession | YP_663343 |
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| Protein GI | 109900088 |
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| COG category | [S] Function unknown |
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| COG ID | [COG5608] Conserved secreted protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 30 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCAGGCAA ACCTTCAAGG ACGTGCAGTG GTACTTACAC GGCAGATCGT CAAGCTAATA
TTCATCACCA TGCTGCTGTC ATCTTGCGCC ACCCTTACCC CTGATTTTGA GAAGCCTGAA
TTGCAGTTAA CCAACTTGAG TATGCTGCCG GCTCAGGGGC TAGAGCAGCG ATTTCGTCTG
ACGTTTCGAG TGACCAATCC GAATAATATC TCTTTCCCGG TAGACGGCAT GAACTTTAAA
CTGAGTTTGC GTGGTTTGCA GGTTGCTACA GGTGTGAGTG ATAAAAAGTT TGTACTTGAG
CCTTTAAGCG ACAATACCTT TGATGTTGAC GTAAGCGCTA GCCTATTCAA TTCCGGTCGG
GTAATACTTG ATATTATGAA TTCTAAGCCT CAAGCATTGG CCTACGAGAT CAACGCTAAA
ATATTCACTA GCAAGGGATT ATGGGGAAAC ATTCCTGTTA CCCGCAGCGG AGTTATTCCG
TTTGGCTTAA CCCAGCCCCA GTAA
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| Protein sequence | MQANLQGRAV VLTRQIVKLI FITMLLSSCA TLTPDFEKPE LQLTNLSMLP AQGLEQRFRL
TFRVTNPNNI SFPVDGMNFK LSLRGLQVAT GVSDKKFVLE PLSDNTFDVD VSASLFNSGR
VILDIMNSKP QALAYEINAK IFTSKGLWGN IPVTRSGVIP FGLTQPQ
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