Gene Patl_3786 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPatl_3786 
Symbol 
ID4175566 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudoalteromonas atlantica T6c 
KingdomBacteria 
Replicon accessionNC_008228 
Strand- 
Start bp4561557 
End bp4562192 
Gene Length636 bp 
Protein Length211 aa 
Translation table11 
GC content41% 
IMG OID638056814 
Productputative integral membrane protein 
Protein accessionYP_663340 
Protein GI109900085 
COG category[S] Function unknown 
COG ID[COG3647] Predicted membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGTAAACG GCGGCAATAA AACAACAGAT TTGGGTTGGT TGCTGCTGTT CATATTGGTG 
TTTATCGCCG TATGGACTAA TTCAATCATT GGTACAACCG ACGTTGCAAA TTGGCTTATT 
GAAAATACGC TGACGGTTAT TTCGCTGCTA TTTTTAATCA TTACCTACAG AAAATACAAG 
TTCAGTATTG TGAGTTATTT TTTACTCTGT GTGTTTTTAT GCTTGCATGT ATATGGTTCA 
AAATTTACTT ATGCCGCGAA CCCTTTAGGG TTTTATTTTC AAGATATTTT TCATTCGCCT 
AGAAACCAAT ATGATCGTCT CGTCCATTTT AGCTTCGGCC TTTTGCTCTA CTATCCCATG 
AAAGAGTGCT TTTCAGTATG GACAAAATAC CCACCGCGAA TTGCCTTCTT TTTGCCCATC 
ACTCTTATAC TTTCAATCAG TGCCCTTTAT GAAATTTTAG AGTGGCTGGT TGCCGACATT 
TTCTTCCCTG CAGAGGGGGA TTCGTACTTG GGCACGCAGG GAGACATATG GGATGCGCAA 
AAAGATATGG GTATTGCGTT TGTTGGGTCG TGCATAGCCG CTTTGTTTTT CTATCTATTT 
AGGTTATTCC GCCAGCCGAA CGTCAAAGAG CCATAG
 
Protein sequence
MVNGGNKTTD LGWLLLFILV FIAVWTNSII GTTDVANWLI ENTLTVISLL FLIITYRKYK 
FSIVSYFLLC VFLCLHVYGS KFTYAANPLG FYFQDIFHSP RNQYDRLVHF SFGLLLYYPM 
KECFSVWTKY PPRIAFFLPI TLILSISALY EILEWLVADI FFPAEGDSYL GTQGDIWDAQ 
KDMGIAFVGS CIAALFFYLF RLFRQPNVKE P