| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Patl_3732 |
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| Symbol | |
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| ID | 4175512 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudoalteromonas atlantica T6c |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008228 |
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| Strand | - |
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| Start bp | 4498197 |
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| End bp | 4500359 |
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| Gene Length | 2163 bp |
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| Protein Length | 720 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 638056762 |
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| Product | phospholipase D |
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| Protein accession | YP_663288 |
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| Protein GI | 109900033 |
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| COG category | [I] Lipid transport and metabolism
[S] Function unknown |
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| COG ID | [COG0398] Uncharacterized conserved protein
[COG1502] Phosphatidylserine/phosphatidylglycerophosphate/cardiolipin synthases and related enzymes |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCTTATA ACGCTTCGTC TTTATTCAAA GAAAATGAAA ATTGCTGGCA AACCAGTCAA
GCGGCTCATG CTACCCCTTT AATTGACGGA GCTAACTATT ATCGGGCCTT ACACAAAGCG
ATTTGTAATG CTAAACGCAG CATTTTCATT GTTGGATGGG ACATTGATAG CCGCATTCGC
TTATTGCGCG GCGACGAGGA AAAAAACGCC AGCGCCCCAT CAGTGATAAG TGAGCTATTA
AAATGGAAGG CAGAGCAAAA CGAAAATATC AAAATATATT TGCTGCGCTG GGACTCATCC
CTAGCGTTTT TTAGCCAACG AGAGATGTGG GCAAAAGAAG TGTGGGATAA CAAAACCCCA
GACAATGTTA AAACCACTCT GGACAGCACC ATCCCTATGG GGGGAAGCCA GCATCAAAAG
ATAGTCGTTA TTGATGATGA AATTGCTTTT TCCGGAGGTA TGGATGTGTC GACTAATCGC
TGGGACACCC GGGAACACCT GATCGATCAA CCCGAACGAG TAGGGCCCGA CGGTCCCCAT
GGGCCACTGC ATGACGTGCA AGTGCTCACC AGTGGACCCA TTGTTGAAAG TTTCGCCCAG
CTTGTCAGGT GGCGCTGGGA CAGGATAAAC GAGCAAAAAG CGATCCCTTT CTCTCCTGTC
AAAAACACAG GCCGCAAGTT ACCTGCGTCA TGGCCGGACA GTTTTCCACC TACCATGGGG
GATTTGCCGT GCGCTGTGGC ACGTACGATA CCGTTTATGG ATGGGGTTGA GCCTGTACAA
GAAGTGCGGC GCCTGCTGCT CGACCTTATT GCGCAAGCTA AGCGCTTCAT CTTCATTGAA
AATCAGTTCA CCACGCGCCA AGAAGTAGCG GAGGCACTTA ATGCTCGTTT AAAGGCGTGT
CCAGAATTAC AAGTGATAAT CGTTAGTTCC TACGAGCCAA AAGGAAAGTT CGAGAGTGAA
GCATATTGGG CAAGTAGGAT TGATTTCAAA CGTATTTTAG AAAACGGGAT AGATGAAAAT
CGCGTTAAAG TGACGTATTC GACGCTGACC AATGAAGCAG GTGAGAGTAT CCAAAAGCGG
GTGCACTCAA AGGTCATGAG TATTGATGAG CGTTATTTAG TGATTGGCTC ATCCAATATT
AGCAACCGCT CTATGAGTCT TGATACTGAA GTCGATTTAG TCTTTGCTGG CGACACAAGC
CAGAACCAGC AAGATATTAT ACGCGTTCGT CATGATTTAC TTGCCGAGCA TACCGGTCGC
ACTATTGAGC AAGTGGAGCA GATTTTTGAA TCGCCAGACC CATTGAATAA CCTTTTAAAT
GACCAAGCGC CTCACGGATA CCAACTCGCT GAAGTCCGCG ATGATCAATT CACCAACAAG
GCGTGGCAAC CCGTTTTTAG TTCGTTATCA GATCCAGAAA AGCCATTGAT TGCACCAATT
CAAATGTCCA ACGGCAAAGT GGTTGGCGTA GGCAACCCCA AACAAAAAAC CATCGTTTTC
ATGCTGATTG CATTATTGGT ACTCGTGCTG GGCGGCTTGA TTTTCTGGGC CGGTCATTCC
ATTCCTTGGC TAACCGCCGA TAATTTAGAG CAATTTTTAC AAGACACAAG GGGCACAATG
TGGGTCATTC CGACCATTTG TGTCATCTAT ATCATCGCTG GATTAGTGTT TTTCCCAGTG
ACGGTTCTAT CCCTCGCGGT GGCGGCAGTT TACGGGCCAA TATGGGGTCC AGTTTATGGC
ATGCTCGGCG CTTTGCTTAG CTCAGCAACA CTGTTTGGCT TAGGCCATAT CATGGGAATT
AAAGGGCTGC GCAAAATGGG CGGAGCTAAA GTGCAAGCCG TAGATGATAA GTTTAAAGAC
AGCGGTGTGG TGGGAGTGGC TGTTATCAGG CTGATTCCTA TTGCCCCCTT TAGTCTCGTT
AATCTTGTCG CGGGTATTTC ATCTATTGGG CTCGTGCAAT TTCTGGCAGG TACATTCTTA
GGCATGTTTC CTCCAATGAT TGCCAAAGGC TTGGTAGGGG ATTCATTAGG TAAGATTTTT
ACAAATCCTT CTCCTGAAAC CATAGGTTAT TTGGTAGCGG GTATCGCCTT CTGGGCGCTT
ATGATTTACG TATGCCAAAA GTTAGCACGC ATGTATCAGT TGAAAAAAGC AGACGCGAGC
TAA
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| Protein sequence | MSYNASSLFK ENENCWQTSQ AAHATPLIDG ANYYRALHKA ICNAKRSIFI VGWDIDSRIR
LLRGDEEKNA SAPSVISELL KWKAEQNENI KIYLLRWDSS LAFFSQREMW AKEVWDNKTP
DNVKTTLDST IPMGGSQHQK IVVIDDEIAF SGGMDVSTNR WDTREHLIDQ PERVGPDGPH
GPLHDVQVLT SGPIVESFAQ LVRWRWDRIN EQKAIPFSPV KNTGRKLPAS WPDSFPPTMG
DLPCAVARTI PFMDGVEPVQ EVRRLLLDLI AQAKRFIFIE NQFTTRQEVA EALNARLKAC
PELQVIIVSS YEPKGKFESE AYWASRIDFK RILENGIDEN RVKVTYSTLT NEAGESIQKR
VHSKVMSIDE RYLVIGSSNI SNRSMSLDTE VDLVFAGDTS QNQQDIIRVR HDLLAEHTGR
TIEQVEQIFE SPDPLNNLLN DQAPHGYQLA EVRDDQFTNK AWQPVFSSLS DPEKPLIAPI
QMSNGKVVGV GNPKQKTIVF MLIALLVLVL GGLIFWAGHS IPWLTADNLE QFLQDTRGTM
WVIPTICVIY IIAGLVFFPV TVLSLAVAAV YGPIWGPVYG MLGALLSSAT LFGLGHIMGI
KGLRKMGGAK VQAVDDKFKD SGVVGVAVIR LIPIAPFSLV NLVAGISSIG LVQFLAGTFL
GMFPPMIAKG LVGDSLGKIF TNPSPETIGY LVAGIAFWAL MIYVCQKLAR MYQLKKADAS
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