| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Patl_3719 |
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| Symbol | |
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| ID | 4175499 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudoalteromonas atlantica T6c |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008228 |
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| Strand | + |
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| Start bp | 4480196 |
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| End bp | 4481017 |
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| Gene Length | 822 bp |
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| Protein Length | 273 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 638056749 |
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| Product | pyrroline-5-carboxylate reductase |
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| Protein accession | YP_663275 |
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| Protein GI | 109900020 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0345] Pyrroline-5-carboxylate reductase |
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| TIGRFAM ID | [TIGR00112] pyrroline-5-carboxylate reductase |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCAACATA GACATATCGC CTTTATCGGC GCAGGAAACA TGAGCAGAAG CATCATCAGT
GGCATGTGTA ACAGTGGCTA CCCAGCTGAT AAAATTATTG CTAGCAATCC ATCTATGCCT
AAATTAACCG CCTTAGAAAG TGATTTTTCT ATCCAAATAA CGCAGCAGAA TGAGCAAGCG
GTTCAAGATG CAGATGTGAT TGTACTTGCC GTGAAACCTC AGCTGATGGA ACAGATGTGT
TCAACCTTAA AAGACAATGT CTCGTTAAAC GGCAAACTGT TTATCTCTAT TGCTGCGGGC
ATTGAAACCT CACGCTTAAG TGAAATGCTT GGCGGTCAGT CAAATATTGT TCGCACTATG
CCAAATACCC CAAGCTCTCT AGGTAAAGGC ATGACTGGCT TGTTTGCTCC GACCCAGGTT
AGTCAGGAAG ACAAAGATTA CGCTGGCGAC TTAATGGCGC AAGTGGGTGA AGTTGCTTGG
GTTGAAAAAG AATCAATGAT CAATGGAGTC ATTGCAGCAG CAGGCAGCAG CCCTGCGTAT
TTCTATGCCT TTTTAGAGGC CATGCAAAAA GAAGCACAAA GCCAAGGATT CGATCATCAA
ACCGCGCGAT TACTTGTTCA ACAGGCTATG TTGGGGGCTG CAGAAATGGT TTGTCACAAT
CCTCAGCTTG AAATCAGTGA ATTGCGCGCC CAAGTTACTT CAAAAGGTGG CACTACCGCC
AAAGCCGTTG AGCATTTTCA AAACAACGGT ATAGACACTT TAGTGTCTGG TGCAATGCAG
GCGGCAGTCA CTCGAGCCGA AGAAATGGCC AAATTATTTT AA
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| Protein sequence | MQHRHIAFIG AGNMSRSIIS GMCNSGYPAD KIIASNPSMP KLTALESDFS IQITQQNEQA
VQDADVIVLA VKPQLMEQMC STLKDNVSLN GKLFISIAAG IETSRLSEML GGQSNIVRTM
PNTPSSLGKG MTGLFAPTQV SQEDKDYAGD LMAQVGEVAW VEKESMINGV IAAAGSSPAY
FYAFLEAMQK EAQSQGFDHQ TARLLVQQAM LGAAEMVCHN PQLEISELRA QVTSKGGTTA
KAVEHFQNNG IDTLVSGAMQ AAVTRAEEMA KLF
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