| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Patl_3645 |
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| Symbol | |
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| ID | 4175425 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudoalteromonas atlantica T6c |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008228 |
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| Strand | + |
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| Start bp | 4392160 |
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| End bp | 4393233 |
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| Gene Length | 1074 bp |
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| Protein Length | 357 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 638056675 |
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| Product | alginate lyase |
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| Protein accession | YP_663201 |
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| Protein GI | 109899946 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.459698 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAGACTA AAACGATAGG CGTGATAGCC TTGAGCCTGC TAACACTGGC TGGGTGTAAT
ACGACCAATA ACGAAAGTGC AAAAACGCCA GTAGTGCCCG CTGACAAATT TGATCTAACC
CATTGGACAA TTACCATCCC CACGGATAAC AACCATGACG GGAAAGTCGA CGGGATAAGC
GCAGCGAAAA TACAAACCTT CCAGCATCCT GACTTCTTTT ACCTTAATGG TGACGGCAAT
ATGGTTTTCG CCGTGCCGAA CAAAGCTTTT ACTACACCCA ACTCCAGCAA CACTCGCAGT
GAGTTACATC AAGTCGTTGC TGACATGGAT GCCAAGAGTG ATAAATTCGC GGATAACTTT
GCTTTGCAAA ATAACAAAGA CGCACAGCTG TACGGTCAAA TAGGCGGTAA CTTACAAGCT
AGCCTTGCAG TGAATCATGT GGCGAAACGC GCTAAGTACC CGAATAAGCC ACCTGCGTTC
TCTGTTGTTG TGGGCCAGAT TCATGCCACC AAGGACAAAG AAAGAGTCGC TGAAGGTGAG
GGCTATGGTT ATGGCAACGA GCCGTTGAAA ATCTACTATA AAAAATGGCC AGAACATAAG
TACGGTTCGG TTTTTTGGAA TTACGAGCGT AATCTCGCCA AAGAAAACCC AGACCGCCAA
GATATAAGCT ATTCGGTATG GGGCACCCCG TGGGATGAAC CAACAGACCC AGGTGAGCAA
GGTATCGCCC TTGATGAATC CTTCAGTTAT GAAGTGAACG TATATCACAA TACCATGTAT
TTAACGTTCA CTAGTGAGCG CCTTGGTACA AAGGAATTTG AGATAAACCT AGCTAATAAC
ATCGATGCCA ATGGGCAAGT AGATAAGCTT GACCACCCGA ACGGTTACTC TGGTGATGCG
AATTTCTTCA AGGCCGGAGC ATACGATCAG TGCAGTATTA AAGACGACCC AGGGATGTGG
TACCCAGCAT GTTTAGGCAC AGGTGATTGG CAAACAGATA AGAAAAATGG CGACTATGCT
CAAGTGACAT TCTCGCGTTT AATAGTTGGA CCTGCTAAAG AACCGCAAAA ATAA
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| Protein sequence | MKTKTIGVIA LSLLTLAGCN TTNNESAKTP VVPADKFDLT HWTITIPTDN NHDGKVDGIS
AAKIQTFQHP DFFYLNGDGN MVFAVPNKAF TTPNSSNTRS ELHQVVADMD AKSDKFADNF
ALQNNKDAQL YGQIGGNLQA SLAVNHVAKR AKYPNKPPAF SVVVGQIHAT KDKERVAEGE
GYGYGNEPLK IYYKKWPEHK YGSVFWNYER NLAKENPDRQ DISYSVWGTP WDEPTDPGEQ
GIALDESFSY EVNVYHNTMY LTFTSERLGT KEFEINLANN IDANGQVDKL DHPNGYSGDA
NFFKAGAYDQ CSIKDDPGMW YPACLGTGDW QTDKKNGDYA QVTFSRLIVG PAKEPQK
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