Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Patl_3582 |
Symbol | |
ID | 4175362 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudoalteromonas atlantica T6c |
Kingdom | Bacteria |
Replicon accession | NC_008228 |
Strand | - |
Start bp | 4308709 |
End bp | 4309209 |
Gene Length | 501 bp |
Protein Length | 166 aa |
Translation table | 11 |
GC content | 42% |
IMG OID | 638056612 |
Product | heat shock protein Hsp20 |
Protein accession | YP_663138 |
Protein GI | 109899883 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG0071] Molecular chaperone (small heat shock protein) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGATGAGTA ATATCAACTT AACGAATCGT TCTACTGACA AAAAACCTTC CGGCCAGTTT CCTCATTTGT TTGGCCAACA TTTTTTGGAT GATTTTGTGC AAAACTTCAG TTCGCATTTT CCGTTCGTAC GAGAGACACC AGCAAAGGGG GAAAGCAAAC TAGATTTTGT GGATCCAAAG GTTGATATCA CTGAGAACAA AAAAGCGTAT ACCTTAACCG CCGAGTTGCC CGGCCTTGAT AATGACGACA TTACCTTAGA TTTATCCGAC GGCATCTTGA CTTTGAGCGG TCAGAAGAAA TACGAAAATG AAGCTGACAA GGACGACAAT ATTCACATTA TGGAGCGTAG CTACGGTAGC TTTCAACGCA GTTTCAGTTT ACCGGTAAGC GTTGACCAAG ATGCGATAAA AGCCGAGTTC AAAAAAGGCT TGCTCAAGGT GACTTTACCC AAATCGGTAA AAGCTCAAGA GCTGCAACGA AAAATCGAAA TTTCTGGTTA A
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Protein sequence | MMSNINLTNR STDKKPSGQF PHLFGQHFLD DFVQNFSSHF PFVRETPAKG ESKLDFVDPK VDITENKKAY TLTAELPGLD NDDITLDLSD GILTLSGQKK YENEADKDDN IHIMERSYGS FQRSFSLPVS VDQDAIKAEF KKGLLKVTLP KSVKAQELQR KIEISG
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