| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Patl_3488 |
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| Symbol | |
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| ID | 4175267 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudoalteromonas atlantica T6c |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008228 |
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| Strand | + |
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| Start bp | 4187062 |
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| End bp | 4188423 |
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| Gene Length | 1362 bp |
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| Protein Length | 453 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 638056517 |
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| Product | twin-arginine translocation pathway signal |
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| Protein accession | YP_663044 |
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| Protein GI | 109899789 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0006] Xaa-Pro aminopeptidase |
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| TIGRFAM ID | [TIGR01409] Tat (twin-arginine translocation) pathway signal sequence |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAACCTGA TGAAAATAAC CAAAAGAGCT TTTATCAAAG CCAGCGCAGC AGCCGTTGCC
TCCCTTCCCC TTTCCCAATC GGTATTTGCA GCAAATAAGC CAGTCGCCTC AGTAGAAGAT
AATGTAGCAA CGTTATCCGA TATAACAGCC TCCAGTCAGC CTATTAGCCT AAGTGAACGC
AAAACCCGCA TACAAAAAGC GCAATCACTG ATGGCAAAAG CAAACATAGC CGCCATGATT
CTAGAGCCCG GTGCAGCGAT GGATTATTTT ACCGGCATTC AGTGGTGGCG AAGCGAGCGC
TTAACCGCTG TGGTGATTCC TCGTGAAGGT GACATTGCTG TTTTATGCCC TTTTTTTGAA
GAGCCGAGTA TCCGTGAATC CCTTAAAGTG GGTGACGATG TGCGCGTCTG GCAAGAGCAT
GAGAGCCCAT TCGCGTTAGT TAAACAGATT TTGACCGATC GCGGCGTGGA TAAAGGCCAA
TTAGCCTTTG AACACTCAGT GCGTTACTTC GTGCTCGATG GGGTAATGAG CCTAATGGGT
AATATGCGCC ATACCTCTGC CGACCCTATT ACTCAGGGCT GCCGCATGTT TAAGAGCGCC
CACGAAATTG CACTTATGCA CAAGGCCAAT GAAATTACCC TTAGGGCGTA TCAACATGTA
TACGCCAACC TAGCCTTGGG CATGAGCCAA CAAGATGTGA ATCAACTCAT GAGCCGTGCT
CAGGCACAGC TCGGTGGCAG CGGGATTTGG ACCATGGCAT TGTTTAATGA AGCCAGCGCG
TACCCTCATG GTAGCAAACA AGCGCAAACC ATTAAGAATG GCTCAATCGT GTTAATGGAC
TGTGGCTGTG CGGTGCACGG TTACCAGTCA GACATTAGCC GCACGTTTGT GTTTGGTGAG
CCGAATAAAA AGCAGCAACA AATTTGGCAA ACCGTGCGTA AAGGCCAACA AGTTGCATTT
GAAAAGGCAC AAATCGGTTC ACCAGCAGGT GCGGTAGATG ATGCTGTTCG TGCTTATTAC
CAATCCCAAG GGTTAGGTCC TGAATATCAA TTACCTGGGC TTTCCCACCG TACCGGTCAC
GGCATAGGCA TGGAAGGTCA CGAACCGCTT AATTTTGTGC ATCAAGAGCA AACACCACTG
CAAACTGGCA TGTGCTTTTC AGATGAGCCG GGCATCTACC TACCCGGTGA ATTTGGCGTA
CGCCTTGAGG ACTGTATTTA CATGACTGAC AAAGGGCCGC GCTGGTTCAC TACCCCGCCT
GATAGCCTTG AGTCACCCCT CGGTACTCTT GCTGCGTTAT CTCCCTTAGA CTCGTTATCC
CACTTAGAAT CTGTATCCCC CACAGAATCA TTATCCCAAT AA
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| Protein sequence | MNLMKITKRA FIKASAAAVA SLPLSQSVFA ANKPVASVED NVATLSDITA SSQPISLSER
KTRIQKAQSL MAKANIAAMI LEPGAAMDYF TGIQWWRSER LTAVVIPREG DIAVLCPFFE
EPSIRESLKV GDDVRVWQEH ESPFALVKQI LTDRGVDKGQ LAFEHSVRYF VLDGVMSLMG
NMRHTSADPI TQGCRMFKSA HEIALMHKAN EITLRAYQHV YANLALGMSQ QDVNQLMSRA
QAQLGGSGIW TMALFNEASA YPHGSKQAQT IKNGSIVLMD CGCAVHGYQS DISRTFVFGE
PNKKQQQIWQ TVRKGQQVAF EKAQIGSPAG AVDDAVRAYY QSQGLGPEYQ LPGLSHRTGH
GIGMEGHEPL NFVHQEQTPL QTGMCFSDEP GIYLPGEFGV RLEDCIYMTD KGPRWFTTPP
DSLESPLGTL AALSPLDSLS HLESVSPTES LSQ
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