Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Patl_3464 |
Symbol | |
ID | 4175241 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudoalteromonas atlantica T6c |
Kingdom | Bacteria |
Replicon accession | NC_008228 |
Strand | - |
Start bp | 4155942 |
End bp | 4157519 |
Gene Length | 1578 bp |
Protein Length | 525 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 638056491 |
Product | methyl-accepting chemotaxis sensory transducer |
Protein accession | YP_663020 |
Protein GI | 109899765 |
COG category | [N] Cell motility [T] Signal transduction mechanisms |
COG ID | [COG0840] Methyl-accepting chemotaxis protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGTTTTTG TGGCAGTACT CGGCCTCATC GCTGCACTGA CTATCAACAA TCTTAGTTCT CATGTAGACC AATATAGCGA CTTACTGGAG CGAGAAGTAA AAGCAGCGCT GTTAATTGAT ACGGTGAATC TCACTTTTAA GCGACAAGTG CAAGAGTGGA AAAACGTACT TCTGAGGGGG AAAGATAGCC AAAAACGTGA AAAATATTGG AATAGCTTCA GTGCACGGCA CAAAGAAATT GAGCAGCAGC TGAATACCTT GAAGAGCATA GATGTCAGTC CACAAGTGCG CGAGCAGTTA AACGACTTTG CTTCAGTGCA TTCAACTTTA TACGACAAAT ACCGGTTGGG CTATCAAGCC TTTATTAATG CAGGTTATGA CCCATACGTT GGCGATAAAG CTGTGGCAGG TATTGACCGA GCACCGACTA AATTGCTTGA AACCCTCAGT GCGCAAATAA GCAGCCAAGT AATATCGCAA AACCAATCCA AGAATAGCCA AGTTAGGCGC TCTTTATGGT GGGGAAGTGT CAGTTTAATT TCAACCATAG TGCTTGGCTT CGCCCTACTG TTGTGGAGTT TAAAAGCATT AGTGACTTCG CCTTTACGTA AATTAAGTGA GCATATTCAT GATGTTAGTC AAGGCCGGCT TGCATCTCCT TTAATGTTTG AACGCCAAGA TGAAATTGGC CAAATGGCTC AGTCAGTAGA AACATTGCGC GTAGACCTGT TAGAGATCCA TTCAGGGCTT GGCGCAACAC AACAAGATTT AGACAGAGTC TGTTTTAGTT TAGTCGACAG CGCTGGCGCC ATCAGCCAGG GGGTTACGGA GCAAAATCAC GGCACGGCCA GTGTGCAAGA AGCGGTGGAT CAACTGTCGC AAGTGGCGCA AGTTATTGAG CAGCATGTTC ATCATGCCGC AGATTCAGCG ACAACAGCGA GTCGCTCAGC GGTCACCAGT ATTGATGTTA TGCAGCAAAC CATTGAGACC ATTTCTGGCT CGTCTAAGCA GATTGAAGAC ACCGCAAAAG TGATTTCAGC GTTAAACGAA GACGCGCGAA AAATAGGTAC CGTATTAGAC GTTATTCAAG GCATTGCTGA GCAAACCAAC TTATTAGCAC TCAATGCTGC CATAGAAGCC GCGCGAGCCG GGGAGCATGG TCGTGGCTTC GCTGTCGTGG CCGATGAGGT CCGTACACTT GCGGCTAAAA CTCAGCAATC TACAGAAGAA ATTCAGCAGA TGATCGCAAA TGTGCAGCAA GGCACCAGTG ATGCGGTAAA TGCGATTAGC CAAGGGCAAG ACCAAACAAA ATTCAGTGTT GATAAGGTGC TTGAAGCCGA TGGTAATTTG AAAGGAGTGA CCAACGCAAT TGAAGATATT GCAGCAGTGA ATCAACATAT CGTTGAAGCG ATTGCCCAAC AAAGCATCGT GACACAAGAC ATACTGCGCC ATTTGAATGA GCTAAGCCAA ATAGCGAAAC TCAATGGTGA GCATGCCCAA TCGTGCGATG AAGATAACCT GACCTTGATG GATGTCAAAG ATCGGATGGC TGGCATCATT AAGAAGTTCG TGCAATAG
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Protein sequence | MVFVAVLGLI AALTINNLSS HVDQYSDLLE REVKAALLID TVNLTFKRQV QEWKNVLLRG KDSQKREKYW NSFSARHKEI EQQLNTLKSI DVSPQVREQL NDFASVHSTL YDKYRLGYQA FINAGYDPYV GDKAVAGIDR APTKLLETLS AQISSQVISQ NQSKNSQVRR SLWWGSVSLI STIVLGFALL LWSLKALVTS PLRKLSEHIH DVSQGRLASP LMFERQDEIG QMAQSVETLR VDLLEIHSGL GATQQDLDRV CFSLVDSAGA ISQGVTEQNH GTASVQEAVD QLSQVAQVIE QHVHHAADSA TTASRSAVTS IDVMQQTIET ISGSSKQIED TAKVISALNE DARKIGTVLD VIQGIAEQTN LLALNAAIEA ARAGEHGRGF AVVADEVRTL AAKTQQSTEE IQQMIANVQQ GTSDAVNAIS QGQDQTKFSV DKVLEADGNL KGVTNAIEDI AAVNQHIVEA IAQQSIVTQD ILRHLNELSQ IAKLNGEHAQ SCDEDNLTLM DVKDRMAGII KKFVQ
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