| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Patl_3452 |
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| Symbol | |
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| ID | 4175229 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudoalteromonas atlantica T6c |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008228 |
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| Strand | - |
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| Start bp | 4142276 |
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| End bp | 4143835 |
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| Gene Length | 1560 bp |
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| Protein Length | 519 aa |
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| Translation table | 11 |
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| GC content | 33% |
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| IMG OID | 638056479 |
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| Product | hypothetical protein |
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| Protein accession | YP_663008 |
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| Protein GI | 109899753 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG3593] Predicted ATP-dependent endonuclease of the OLD family |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGAAATAA TTAAGTCCGT TCAGATTAGA AAATTTCGTT CATTAAAGTC AGTAACCAAA
AATTTGGAGT TTTCAGACCT TAATATTTTT GTAGGACAAA ATGACCAAGG GAAATCGAAC
TTGTTGAGAG CATTAAATCT TTTCTTCAAC AATGAAACGG ATTTAGATAC TCGCTTTAGA
TTTTCAGAGG ATTACTGTTA TCACTCAAAT ACTGGCAAGG GTACCAGAAA TGAAATTAGG
ATAGATTTAG TTATTGAACC ACCTAAAAGA CGCTTTAAGC ATGCAAAGCC GTTAAGATGG
ACAAAACGGT GGAGAAAAGA TGGATCTATC ATTGAAGAAA GAAAATATAT AGAAAGTGGT
AATGAAGTAC CTTCTAGGGA TGGCGTGTCA CAGTGGTTAG ATAAAATTAG ATATAGGTAT
ATTCCTGCGA TAAAGGGACA AAATTATTTT TTAGCTTTAA TGGGGGAACT TTACGATGTA
CTGAATGAAG CTTACGCAGA TATTTTATCT ACGCAAGGTG AAGAGTTCAT AAGTGGAATC
CAGAATATAA CTAAAGGCAT AACTGAAGAT TTATCTGAAC AAATTGGGAT TTCAAATACA
ATTCAAGTTC CCTCAGACTT TAAGCAGTTA TTTTCTAATC TAGATTTTGG TGTTCGAGTA
AGTGGTAATA CTTACCACTT AAAGCAACGC GGTGATGGAA TAAAAATTAG ACATATACCA
GTGATTTTAA AATATATGTC AGAACAAGAA CGAAGTATTT CAAGAGCGGG TTATGTTAAG
CCTGACACTA TTTGGGGTTT TGAGGAACCT GAAAATAATC TAGAGTTAAG ATACGCCTTT
GAGTTAGCTA AAACCTTTAA GGAGTACTCA AAAGATATTC AAATTTTTAT TACAACACAT
TCGCCTGCAT TTTATGCACT TGATAAAACT GATGGTGATA ACGTAAATAC GTTTTACATT
TCACAAGGTG AAGATAACTG TACTCAGGTT GATGTTGTTT CGCATGATAA AACTAATGAA
CTTCATGAAA GTATGGGATT GCTTCCAATT ATCACTCCTT ATTTGACTAA AATATATGAG
CATCAAAGCG AAATTGAAAA CTTAAAGTCT AAGTTAATTC AACTTGAAGA TAGTATACGC
TTTGTTGTTT TAACAGAGGA TGAAAAACAT GAACATGTTA TTTCATATTT TAAAGCGCAA
GGTTGCAATG AAGAAGTAAC TGAGTTTTAC TCTTACCTCG GTGCCAATCA AATAAGCTCG
GCGCTCATTC TAGGCCAATA TTTAAAAGAT AAAAAACCTG ATATACATGT AATTATTCAT
AGAGATAGAG ATTATTATAA TGATAAAGAT ATAGAATCTA TGAGAAATAG AGTCGAAAAA
AAAGGTTTTA CTTTTTTCGT TACTAAAGGT GTGGATTTAG AGTCAGAGTA TATCTGTCCG
AAACATATTA ATGCTTTATA TCAAGAAATT TCATTAGAGA AGGCTGAAAC ACTAATCCAT
AGTGCAACCC TGGGGGATCC CCTCATAGAA TTGGTCTCCC TTCTTTGTGA ACCCAGGTAA
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| Protein sequence | MEIIKSVQIR KFRSLKSVTK NLEFSDLNIF VGQNDQGKSN LLRALNLFFN NETDLDTRFR
FSEDYCYHSN TGKGTRNEIR IDLVIEPPKR RFKHAKPLRW TKRWRKDGSI IEERKYIESG
NEVPSRDGVS QWLDKIRYRY IPAIKGQNYF LALMGELYDV LNEAYADILS TQGEEFISGI
QNITKGITED LSEQIGISNT IQVPSDFKQL FSNLDFGVRV SGNTYHLKQR GDGIKIRHIP
VILKYMSEQE RSISRAGYVK PDTIWGFEEP ENNLELRYAF ELAKTFKEYS KDIQIFITTH
SPAFYALDKT DGDNVNTFYI SQGEDNCTQV DVVSHDKTNE LHESMGLLPI ITPYLTKIYE
HQSEIENLKS KLIQLEDSIR FVVLTEDEKH EHVISYFKAQ GCNEEVTEFY SYLGANQISS
ALILGQYLKD KKPDIHVIIH RDRDYYNDKD IESMRNRVEK KGFTFFVTKG VDLESEYICP
KHINALYQEI SLEKAETLIH SATLGDPLIE LVSLLCEPR
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