| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Patl_3436 |
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| Symbol | |
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| ID | 4175213 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudoalteromonas atlantica T6c |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008228 |
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| Strand | + |
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| Start bp | 4120933 |
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| End bp | 4121865 |
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| Gene Length | 933 bp |
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| Protein Length | 310 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 638056467 |
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| Product | PEP motif-containing protein |
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| Protein accession | YP_662996 |
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| Protein GI | 109899741 |
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| COG category | [I] Lipid transport and metabolism
[R] General function prediction only |
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| COG ID | [COG3240] Phospholipase/lecithinase/hemolysin |
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| TIGRFAM ID | [TIGR02595] PEP-CTERM putative exosortase interaction domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGAACAACC TGACTCTGCC ACTGTCCAGT GGATTGAATT ATTTACTTAA AAAAACTAGA
AGAACACTGT GTGTATCTGG AGCATCACTA CTGATGTTTG TCAGTTCAAC AGCATCCGCC
ACGCCTATCA GTGATATGTA TGTGTTCGGT GATTCGCTAT CGGATACTGG CGCATTAAAA
ACACTCCTCC CTGCAGCGTG TCCTACCGCC CCCTATTTTG ATTGCCGATT TTCTAATGGC
CCAGTATGGG TTGAGCATTT GGCTAGTGAC TTAGGTGTAT CCGCAAGTAC TGCTTATACA
GGCGGCACAA ATTGGGCCAT AGGCGGCCAG CGCACTGACA ATTTATTTGC TGACCCCAAC
TTTGGTGGTC AACTTTTTAA CTACTTAGGT AGCGCAGGTG GTATGGCAGA TGCCGATGCA
CTCTACGTGA TCTGGGCTGG TGGCAATGAT TTTTTGCAAA ATGATCCCGT TGGCACCTAT
ACCCCGGGCG ATGCAGCGCA AAACATTGTT GACAGTGTGA CCACTTTAGC AATGGCGGGG
GCGATGAACT TTCTAGTGCC GAATTTACCC ATTGCAGCGC CTTGGGCTTT TGAATTTAAT
GCCGCGTTAG CAAACGGCTT AGATGGCATC AGTGGCGGCT TAAACATCAC CCAACTTGAT
GTGTTTAGTA CGTTTTTAGA TATATCAATG AACCCCAGTG ATTATGACCT AACGAACGTA
TCAGCTCCTT GCGTTGACTC GGCAAATATG ACCGTGTGTA CGAATCCTGA TGAGTACTTA
CTTTGGGACC AAGTTCACCC TACTGCCGTG GGTCACCAAC TTATTGCCTC TGCCGCACTC
GCCGCTTTAG CAGTACCTGA GCCCGCCTTA CTGGCGCTTT TTGGTTTTGG CATGTTAGCG
CTGGTACGCA CAAGACGGAA AGTGTTTCCT TAA
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| Protein sequence | MNNLTLPLSS GLNYLLKKTR RTLCVSGASL LMFVSSTASA TPISDMYVFG DSLSDTGALK
TLLPAACPTA PYFDCRFSNG PVWVEHLASD LGVSASTAYT GGTNWAIGGQ RTDNLFADPN
FGGQLFNYLG SAGGMADADA LYVIWAGGND FLQNDPVGTY TPGDAAQNIV DSVTTLAMAG
AMNFLVPNLP IAAPWAFEFN AALANGLDGI SGGLNITQLD VFSTFLDISM NPSDYDLTNV
SAPCVDSANM TVCTNPDEYL LWDQVHPTAV GHQLIASAAL AALAVPEPAL LALFGFGMLA
LVRTRRKVFP
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