Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Patl_3382 |
Symbol | |
ID | 4175159 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudoalteromonas atlantica T6c |
Kingdom | Bacteria |
Replicon accession | NC_008228 |
Strand | - |
Start bp | 4056106 |
End bp | 4057302 |
Gene Length | 1197 bp |
Protein Length | 398 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 638056413 |
Product | major facilitator transporter |
Protein accession | YP_662942 |
Protein GI | 109899687 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG0738] Fucose permease |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGATCGCC GCGCAGCTAC GTCTGTCATC TTTGCTGGGT TTTTCTTTCT TGGCATGGTG TTTATTTTAT GGGGAGTATT GTTGCCAGAC TTGGCTGAGA GTCTGGCGAT GAGTGAGGTG ATAAGTGGTG CCTTTTTTAC CTTAATCTCT ATCGGTATGA TCCTCGGTGC TATCTTGGGT GGTAAATACG CGCAGAAGTT TGATTTTATG TCACTCTTTG CCGTATTGCT TGTGTGCGTT TTGGTACTAC TGCTTGCTAT CTCATTTGTG CAGCATTGGT TCTGGTTGTT AGTAGGAGCG CTAGTGCTGG GCATGTTTGC TTCGAGTCTA TTTACCATAG GTCATACAGT TATTGCTCGC TTACATGCTC ATAAGCGCTC AGCGATGATG GGCTTTATGG ACTTCATGTT TAGCCTAGGC ACATTGGCCG CACCATTTTA TGTCTCTGGC TTGTACTTAA TAGAACACGA TTGGCGCTGG CCGCTACGTA TTCTAGCTGC CGGTTTACTT TTGTTAGCCG GATATACCTG GCGCGTAGCA CATCAAGGCA AAAAACTGGT GGCGCCTGAA GAGGCTAAAA AGAATCGCAA AAGCCTGTCT TATGGCGACA TTATTCGTCG CCCCGTCTTT ATATTTCTAG CCCTTGCTGC ATTTGGCTAT GGCATGGTGG AGTTTGGTAA CGCTAATTGG TTTGTAAGTT ACGCACAGAA TGGCCATGGC TTTAGCGGTG AGCAATCACG TTTAGTGTTC GCTTTTTTTA CCGCGGGTAT GGTGGTGAGC CGCCTTGTAT TTGCGCTGTT ACTAAAGTGG TTAACCTCAC ACAGATTGAT GCTGATTTTG GCGACTATCA TGGTCGCTGG CTGCTTTATG ATCAAGCTCG CGGTTGACCC TGTAGTGATG TCGTGGGGGA ATTTCATGTT GGGATTAGGT TTAGGCGGCT TATTCCCGCT TATGCTGTCG GCTGCAATGG ATGTGGACAG CGATAAAGGG CCAATTATTT CAGGTTTATG CGTTATTGGC TCCTCTATTG GCGTACAGGT AGCATCTTTC AGTACAGGCT TGTGGGCACA TTTCGCCCCT TTAACCACCG CCTTTTGGGT TATCCCTATC GGTGGTGCTT GGCTATGGTG TATGGCGTGG GCTTATAGCC GTTTCATAAA AAGACATATC GCATCAAGCA AGGTTGATGT TAATTAA
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Protein sequence | MDRRAATSVI FAGFFFLGMV FILWGVLLPD LAESLAMSEV ISGAFFTLIS IGMILGAILG GKYAQKFDFM SLFAVLLVCV LVLLLAISFV QHWFWLLVGA LVLGMFASSL FTIGHTVIAR LHAHKRSAMM GFMDFMFSLG TLAAPFYVSG LYLIEHDWRW PLRILAAGLL LLAGYTWRVA HQGKKLVAPE EAKKNRKSLS YGDIIRRPVF IFLALAAFGY GMVEFGNANW FVSYAQNGHG FSGEQSRLVF AFFTAGMVVS RLVFALLLKW LTSHRLMLIL ATIMVAGCFM IKLAVDPVVM SWGNFMLGLG LGGLFPLMLS AAMDVDSDKG PIISGLCVIG SSIGVQVASF STGLWAHFAP LTTAFWVIPI GGAWLWCMAW AYSRFIKRHI ASSKVDVN
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