Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Patl_3380 |
Symbol | |
ID | 4175157 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudoalteromonas atlantica T6c |
Kingdom | Bacteria |
Replicon accession | NC_008228 |
Strand | + |
Start bp | 4053601 |
End bp | 4055130 |
Gene Length | 1530 bp |
Protein Length | 509 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 638056411 |
Product | alkaline phosphatase superfamily hydrolase |
Protein accession | YP_662940 |
Protein GI | 109899685 |
COG category | [R] General function prediction only |
COG ID | [COG3083] Predicted hydrolase of alkaline phosphatase superfamily |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.99522 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGATTTTAA CAGAAACGCC TAGACGCAAA TTAGTCACGC AGTTAGTTAC TTGGGGCCAT TGGTTTGCGC TTTCAAATAT GATTCTGGCC ATCGCGATTG CCAGTGTCTA TATTTTTAGC TCACCCGCCC CTGAAACGCC ATTGGGGATC ACTTATTTAC TGACTAACTG GATCAGTCAT ATAGGGTTTC TGACTTTCTT CGGGTTTATC ATTCTGATAT TACCCTTGTG CTATCTAGTA CCTAACGCGC GAACGGTCAA AGTGGTAAGC GCTGTTTTAG CTGCGGTGGC ACTCGCCATG CTCGGGTTTG ATGCATTGCT GTATAACAAA TACGGTGTGC ATCTGAGCTT TTCTACCGCT GAAATGCTAA GAAGTGAAGC CAACACCAGT ATGTCGTTGT TTGGTTGGCA AAGGTGGGCT TTTTTCTTTC TCATCTTTAT ATTCTGGTTG TCTGCTCAAT TAGTCATCGC TAATGCGCTT TGGAAGCGTG TTGCGCGCTT GCAAAAACGT AAATTGGCCT TGCCAATCAG CAGTTTTTTT GTGGTTTGTT TTGTGTCTAG CCATGCTCTG CATATATGGG CTGACGCGAA CTTGTATCAC CCTATTGTGC AGCAAGATGA TTTATTTCCG TTATCTTACC CAGCCACAGC GAAAACCTTG ATGTCTCGTT ATGACCTGCT TGACAGAGAC AACTATGAGC AACGTCTTGA GCTGCAATTT GATGATCGGA TCAGCCAAAT TAACTATCCT TTGTCGCCTT TGTATTGCTC GGTGTCTGTA CAGAAGAAAG TGTTATTATT GGTCAATACG GACACGCAGG CGAGCACGCT TGAAACAACC TTAAGCCATC ACATTCCGCT ATACGCTGAT CAATCATCAG CAAGCGATAG CCAGCGCAGT TACCTGTTTG GTCTACCTGA GCTATATCAT TCAGCGCTTA GCAAGAAAAC GCCTATTTTG CTGGAGTTAC CTGCCGCTTT AGGATTACAG GTGGGTATTT TTGCGAATGA ACTTGAGGCT GGTAAACAAA CACAGAAATT CAGCCAACAA TGGTCTGATT TCGAGCAAGG CGTTACCTCC GCCAAGACGA ACCTTGCCAT AGGCTTTGTC AGCAATGAGC AACTCAGTGA CATACTCGCT ACCTCGCAAG TGATGCAGGA TTACCAAGTA TTAGTTGTGA ACACAACTGA AGCTGGCGAG TATGCTCTGT ATAGCACTAA CACGCTTTTC GCTGACTTTG CCAGCAGTGA AGACTTAGCG CCTACCATAC TGAATTTGTT GGGTTGTAAC GCCCCTACGC AAAATTACAG TACCGGGCGG GACTTGAGCA AGCCAGGGCG TGACTGGTTA GTAACCACCC AAGAGCGTAT GGTTATTGTG ATGCAAGATA ACAAGCGCAT TGAGGTCTCC AGTAACGGTA ACAGTAAAGT GTATAACTTA TTAACTGCTA AAGAGTTACC GGATGACGCT GATACACGCT TGCTCAGCCA AGCAATTAAA CGTCTCAGCA GTTTCGCCGC GCCACGTTAA
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Protein sequence | MILTETPRRK LVTQLVTWGH WFALSNMILA IAIASVYIFS SPAPETPLGI TYLLTNWISH IGFLTFFGFI ILILPLCYLV PNARTVKVVS AVLAAVALAM LGFDALLYNK YGVHLSFSTA EMLRSEANTS MSLFGWQRWA FFFLIFIFWL SAQLVIANAL WKRVARLQKR KLALPISSFF VVCFVSSHAL HIWADANLYH PIVQQDDLFP LSYPATAKTL MSRYDLLDRD NYEQRLELQF DDRISQINYP LSPLYCSVSV QKKVLLLVNT DTQASTLETT LSHHIPLYAD QSSASDSQRS YLFGLPELYH SALSKKTPIL LELPAALGLQ VGIFANELEA GKQTQKFSQQ WSDFEQGVTS AKTNLAIGFV SNEQLSDILA TSQVMQDYQV LVVNTTEAGE YALYSTNTLF ADFASSEDLA PTILNLLGCN APTQNYSTGR DLSKPGRDWL VTTQERMVIV MQDNKRIEVS SNGNSKVYNL LTAKELPDDA DTRLLSQAIK RLSSFAAPR
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