| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Patl_3317 |
|---|
| Symbol | |
|---|
| ID | 4175094 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudoalteromonas atlantica T6c |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008228 |
|---|
| Strand | - |
|---|
| Start bp | 3979386 |
|---|
| End bp | 3980780 |
|---|
| Gene Length | 1395 bp |
|---|
| Protein Length | 464 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 48% |
|---|
| IMG OID | 638056348 |
|---|
| Product | phosphate ABC transporter, inner membrane subunit PstC |
|---|
| Protein accession | YP_662877 |
|---|
| Protein GI | 109899622 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG0573] ABC-type phosphate transport system, permease component |
|---|
| TIGRFAM ID | [TIGR00974] phosphate ABC transporter, permease protein PstA
[TIGR02138] phosphate ABC transporter, permease protein PstC |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAAACCC CGACACTCAT CATTCTGACC CTTCTATGTG CTGCAGGCGC TTATATTTTA
GTGCGTAATC GTGCGTCTGA TATCGCCTAT CGAGCTGGCA AAAAGCCTGC GCTCCACTCG
TTACCTTATT ACTACGGCAT GCTTAGCGCG CTTTGGTGTG CCTTGCCTTG CTTGTTGATC
GTGTTTGCTT GGACTGTCCT CGATGATTAC GCAGTTCACG CCGCTATTGT GAACTTGTTA
CCAGAATCGG TGCAAGCCTT GCCCGCAAGC GAAATTGATT TGATGGTCAA TACCGTGATT
AATCTAGCCT TGTATCCCAA TGCGTTACTG AGCAGCAGCA CGCCAGATTA CCTCATTCAA
GCAGGGCAAG ATTACTTGCG ATGGCAGCAA CTTAGCCAGC TTAGTCTATC GGTCGTGGTG
TTGATTACTT TGTTTTTGGC TTTTTCGTTA TGTTGGGCGC GAATAAAACC CAAAGTGAAG
GCGCGTCAAC AAGTAGAGCG CATATTCAAA TGGACACTCC TACTGTGCGC TAGCATCGCT
ATTTTGACGA CTATCGGTAT TGTGGTGTCG GTATTATTTG AATCCTTGCG GTTTTTCCAA
TCTGTGGGCT TTTTTGAATT TATATTCGGC ACACATTGGA GCCCTCAGAC GGCATTGCGT
GTTGATCAAG TAGGCGCCTC CGGTGCTTTT GGGGCGGTTC CCTTGTTTGT AGGAACACTG
CTTATTTCCT TTATTGCCAT GCTGATTGCC GTACCAGTGG GGTTGATGTC AGCGATTTAT
CTATCAGAAT ACGCTACCCC AAGATTGCGC GCCATCGTCA AACCTATGCT TGAAATTTTG
GCGGGTATAC CCTCGGTTGT GTATGGTTTT TTCGCGGCAC TGACCGTGGC ACCGTTTATT
CGTCAATCCG GAGGCTTTCT CGGCTTGGAG GTATCCTCTG AAAGTGCGCT GGCTGCAGGC
TTAGTGATGG GCGTGATGAT CATCCCATTT GTCTCATCTT TATCCGATGA TGTTTTAAAA
GCGGTGCCTC AGTCACTACG TGATGGGTCA TTAGGATTAG GGGCAACACA GTCTGAGACC
ATCAAGCGGG TGGTGATTCC CGCCGCGTTA CCGGGTATCG TCAGTGGGGT GTTATTGGCG
GCATCACGGG CGATTGGTGA AACCATGATA GTCGTAATGG CGGCTGGTTT GGCCGCGCAT
CTTACGGCAA ATCCACTTGA GTCAGTGACT ACTATTACCG TGCAAATCGT CACGCTATTA
GTAGGCGATC AAGAATTTGA TAGTCCTAAA ACCTTGTCTG CATTTGCTTT GGGCTTAATG
CTGTTTACCG TGACGTTAGC CCTCAACTAT GTGGCCTTGT ACGTGGTGCG CCAATATCGT
GAAGAGTACG AATAA
|
|---|
| Protein sequence | MKTPTLIILT LLCAAGAYIL VRNRASDIAY RAGKKPALHS LPYYYGMLSA LWCALPCLLI
VFAWTVLDDY AVHAAIVNLL PESVQALPAS EIDLMVNTVI NLALYPNALL SSSTPDYLIQ
AGQDYLRWQQ LSQLSLSVVV LITLFLAFSL CWARIKPKVK ARQQVERIFK WTLLLCASIA
ILTTIGIVVS VLFESLRFFQ SVGFFEFIFG THWSPQTALR VDQVGASGAF GAVPLFVGTL
LISFIAMLIA VPVGLMSAIY LSEYATPRLR AIVKPMLEIL AGIPSVVYGF FAALTVAPFI
RQSGGFLGLE VSSESALAAG LVMGVMIIPF VSSLSDDVLK AVPQSLRDGS LGLGATQSET
IKRVVIPAAL PGIVSGVLLA ASRAIGETMI VVMAAGLAAH LTANPLESVT TITVQIVTLL
VGDQEFDSPK TLSAFALGLM LFTVTLALNY VALYVVRQYR EEYE
|
|---|
| |