| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Patl_3269 |
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| Symbol | |
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| ID | 4175046 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudoalteromonas atlantica T6c |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008228 |
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| Strand | + |
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| Start bp | 3920934 |
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| End bp | 3922034 |
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| Gene Length | 1101 bp |
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| Protein Length | 366 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 638056300 |
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| Product | 3-isopropylmalate dehydrogenase |
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| Protein accession | YP_662829 |
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| Protein GI | 109899574 |
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| COG category | [C] Energy production and conversion
[E] Amino acid transport and metabolism |
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| COG ID | [COG0473] Isocitrate/isopropylmalate dehydrogenase |
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| TIGRFAM ID | [TIGR00169] 3-isopropylmalate dehydrogenase |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGTCAAATT ATAACATTGC CGTATTAGCG GGAGATGGCA TTGGCCCAGA GGTCATGCAA
GAAGCGAAGA AAGTATTATC AGTTGTAGAG CAAAAATTTA ATCTGACGTT TACGCTGAAT
GAATTTGATG TTGGCGGAAT CGCCATCGAC AATCACGGTA AAGCCCTACC TGAGGCAACG
CTGAAAGGCT GTGAAGATGC TCAAGCCATT TTGTTTGGCT CCATTGGCGG CCCAAAATGG
GACAGCCTAC CGTTGGAGGA GCGCCCTGAA CGAGCAGCCC TATTGGCTTT ACGCGGTCAC
TTTGATTTGT TCAGTAACTT GCGCCCAGCG AAAATCTATC CGGGTCTTGA GTCTTTATCT
CCTCTGCGTG CAGATATTGC CGCCAGCGGT TTTGATGTCC TTGTTGTACG CGAACTAACA
AGTGGTATTT ATTTTGGCCA GCCAAAGGGC ATCGAAGGTG AAGGCGAAGA GCAATTCGCT
TATGACACCA TGCGTTACAG CAAAAAAGAA ATTCGCCGTA TCGCCATCAG TGCCTTTGAA
GCCGCACAAA AACGTGGCAA AAAAGTCACA TCGGTTGATA AAGCTAACGT ATTAGTGTGC
AGTCGTTTAT GGCGTGAAGT CACCGAAGAA GTCGCTAAAG ACTACCCAGA CGTGACGCTA
GAACACATCT ACATTGACAA CGCGACCATG CAATTATTAC GTTACCCCGG CGATTTTGAT
GTGATGCTAT GTTCAAACTT GTTCGGGGAC ATTATCTCAG ACGAGTGCGC CATGATTACA
GGCTCAATGG GTTTATTGCC ATCAGCTAGC ATAAACAGCG AAAACTTTGG TTTATATGAG
CCTGCAGGCG GCTCAGCACC GGACATCGCA GGCAAAGGCA TTGCTAACCC CATTGCGCAA
ATTTTATCAG CATCTATGCT ACTGCGATTT AGCTTAAATC TAAATGACGC TGCAGATGCA
ATTGATGCCG CCGTGTTGAA AACGCTGGCA GATGGCGTAT TAACCGGTGA GCTACTTAGC
CCAGAAAACC ACGACCAAGC CAAATCGACC AGTGAAGTAG GCGACTATAT AGCGAATATT
ATCGCCAGCG CAAACGCATA A
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| Protein sequence | MSNYNIAVLA GDGIGPEVMQ EAKKVLSVVE QKFNLTFTLN EFDVGGIAID NHGKALPEAT
LKGCEDAQAI LFGSIGGPKW DSLPLEERPE RAALLALRGH FDLFSNLRPA KIYPGLESLS
PLRADIAASG FDVLVVRELT SGIYFGQPKG IEGEGEEQFA YDTMRYSKKE IRRIAISAFE
AAQKRGKKVT SVDKANVLVC SRLWREVTEE VAKDYPDVTL EHIYIDNATM QLLRYPGDFD
VMLCSNLFGD IISDECAMIT GSMGLLPSAS INSENFGLYE PAGGSAPDIA GKGIANPIAQ
ILSASMLLRF SLNLNDAADA IDAAVLKTLA DGVLTGELLS PENHDQAKST SEVGDYIANI
IASANA
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