| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Patl_3253 |
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| Symbol | |
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| ID | 4175030 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudoalteromonas atlantica T6c |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008228 |
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| Strand | - |
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| Start bp | 3902779 |
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| End bp | 3903015 |
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| Gene Length | 237 bp |
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| Protein Length | 78 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 638056284 |
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| Product | Heme exporter protein D (CcmD) |
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| Protein accession | YP_662813 |
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| Protein GI | 109899558 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG3114] Heme exporter protein D |
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| TIGRFAM ID | [TIGR03141] heme exporter protein CcmD |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGCAATTTG AAAGTGTCAG TGCATTTTTA GATATGGGCG GCTACGGATT CTACGTGTGG
CTGTCTTTCG GCGTTAGTTT ATTGGCTCTC GCTATTCTCG CTTTTGATGC AGTTCGCCAA
AAAAAGCAAT TGTTTAATGC CGTAGAAAAA GAGCAGGCCC GAAAAACACG TATTAAAGCG
GCGAAGGCTA CTGCAGCAGC GCAAGCGTCG CTACAAAACG AGGAAGAAAA AAAATGA
|
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| Protein sequence | MQFESVSAFL DMGGYGFYVW LSFGVSLLAL AILAFDAVRQ KKQLFNAVEK EQARKTRIKA
AKATAAAQAS LQNEEEKK
|
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