| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Patl_3240 |
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| Symbol | |
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| ID | 4175017 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudoalteromonas atlantica T6c |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008228 |
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| Strand | - |
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| Start bp | 3889455 |
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| End bp | 3890051 |
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| Gene Length | 597 bp |
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| Protein Length | 198 aa |
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| Translation table | 11 |
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| GC content | 42% |
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| IMG OID | 638056271 |
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| Product | ABC-2 type transporter |
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| Protein accession | YP_662800 |
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| Protein GI | 109899545 |
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| COG category | [G] Carbohydrate transport and metabolism
[M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG1682] ABC-type polysaccharide/polyol phosphate export systems, permease component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGCCAACGT TCACGTTTAT GGCTATCGGG ATCCTATTTA TTCAATGTTT TTTGCAGACC
ATGGGTGGTT CAGCAAGGGC AATTAGCAAA AATAAAGCCT TATTTGCATT CAGGCAAGTT
CAACCTATAA GTGCTGTTAT CGCCGGTGCC TTATTCCAGA TGCTGGTAAA AATATTCGTT
ATCGCTGGTA TCCTAGTCAT CATGTACTTC ATGGGTATGG ATATTCAGGT TTCTGATCCT
TTATTATTTT TAGCGTGTTT CATTTTGCTA TGGATTTTCG CTGTGGCGGT CGGTTTGATA
TTTGGTATTG CAGAGATGTT CATTTCTGAG TTGGGAAAAG TCAGGGAGTT ACTTACCCGA
CCGATGTTTT TCATTTCGGG CGTCTTCTTT TCATTGCAGG ATTTTCCGCA AGAATACTGG
CATTACCTCG ATTGGAATCC CATTCTGCAT GCTATCGAAT TAGCCCGCTA TTCTGCTTAT
TCCACCTATG GAATTGAAGG GGTGAGTATG TCGTTTCTAG CAGGGTGTGT GTTAAGTTTT
AGCTTCCTTG CTCTGGCGCT TTATCAAGTA TCTTGGAAGC AGGCAATCAG TCGATGA
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| Protein sequence | MPTFTFMAIG ILFIQCFLQT MGGSARAISK NKALFAFRQV QPISAVIAGA LFQMLVKIFV
IAGILVIMYF MGMDIQVSDP LLFLACFILL WIFAVAVGLI FGIAEMFISE LGKVRELLTR
PMFFISGVFF SLQDFPQEYW HYLDWNPILH AIELARYSAY STYGIEGVSM SFLAGCVLSF
SFLALALYQV SWKQAISR
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