Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Patl_3108 |
Symbol | |
ID | 4174881 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudoalteromonas atlantica T6c |
Kingdom | Bacteria |
Replicon accession | NC_008228 |
Strand | - |
Start bp | 3740624 |
End bp | 3741580 |
Gene Length | 957 bp |
Protein Length | 318 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 638056135 |
Product | hypothetical protein |
Protein accession | YP_662668 |
Protein GI | 109899413 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG3591] V8-like Glu-specific endopeptidase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.0133879 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACTAATG GAAATGAAAA AGATGTTGAA TCCCCCTTAG CCTACGATCA AGTGGCTAAA TTTTTTGCTA GAAGTTCGAA AGGTAAAATT CCCAAGGAGC TGCAGTCGAT GCTCCTGCCT GAGTTAAAGA GTTACAAACT GAAGAGCGTC GAGCATAAAA GTATCCAAGA TGCTGACAAT AAACCAACCA TCCCAATGAT ACCTAAGTGG TTCGGCACCA GCCCAAAGCC TTGCAAAGCA AAGCTAGCTA AGCCCACGCG GGTATCTCTC AATGGCAAAG ACTTATCGCC ATTAACGGTT TTTAACGCAG AAGACCGCAG AATATACAAT GACACGAGCT ATCCATGGGG AACCATTTGT AAAGTCGTCA CTTCATCTGG GAGTGGGTCT GGCGTTATTG TAGGTCCTCG CCATGTGTTA ACGGCAAGTC ACGTAGTTGA TTGGAGTTCA AATGGGGCTG GCACGGTTGA AGTACATAGG TCTGCCGGCT CTCTTAGAGC AAGCACATCT ATATCAAGAG TTTGGTTTTA CACCAAAATT ACTGGACGTA CTGTCAGTTG GTTTGAGGTT GATGAAGATT ATGCCGTGTT AGTGACGAGT GATAGGATCG GTGATTTATT TGGTTGGATG GGAACTCGGA CATACAACAG TTCATGGGAT GGCGAACCCT ATTGGTTCAA CATCGGTTAT CCTGGAAGTA TAGGCGGTGC ATTGCGCCCA ACTTATCAAA GGGATAAGAA ACTTGATGAG CCTTGGTATG ATCTCGGCCC AGGTAGATCG ATGAGCACCC ACGCGGATTT AACACCTGGT AACTCGGGTG GGCCTATGTT TGCATTTTGG AACGATGGGC CATATGTCGT TGCCGTTGCA TCAGCGGAAG CATCTGATGA AAACTGGTGC TCGGGAGGTT CTTGGATGAC AAATCTCGTG CGTCACGCTA GAGAACAAGA CGCATAA
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Protein sequence | MTNGNEKDVE SPLAYDQVAK FFARSSKGKI PKELQSMLLP ELKSYKLKSV EHKSIQDADN KPTIPMIPKW FGTSPKPCKA KLAKPTRVSL NGKDLSPLTV FNAEDRRIYN DTSYPWGTIC KVVTSSGSGS GVIVGPRHVL TASHVVDWSS NGAGTVEVHR SAGSLRASTS ISRVWFYTKI TGRTVSWFEV DEDYAVLVTS DRIGDLFGWM GTRTYNSSWD GEPYWFNIGY PGSIGGALRP TYQRDKKLDE PWYDLGPGRS MSTHADLTPG NSGGPMFAFW NDGPYVVAVA SAEASDENWC SGGSWMTNLV RHAREQDA
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